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AMDSBA5_92

Alias: AMDSBA5_C91

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_92_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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150..449
DNA (300bp) protein (100aa)
transposase mutator type
MULE transposase, conserved domain n=9 Tax=Mycobacterium RepID=H1JX50_9MYCO (db=UNIREF evalue=4.5e-14 bit_score=82.8 identity=47.2 coverage=88.0)
Transposase n=2 Tax=Sulfobacillus acidophilus RepID=F8IAQ4_SULAT
Plasmid, complete sequence {ECO:0000313|EMBL:AEW06983.1}; Uncharacterized protein {ECO:0000313|EMBL:AEW04067.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Fa
AMDSBA5_92_2
unknown

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660..932
DNA (273bp) protein (91aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
seg (db=Seg db_id=seg from=31 to=45)
seg (db=Seg db_id=seg from=55 to=67)
AMDSBA5_92_3
unknown

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comp(1237..1560)
DNA (324bp) protein (108aa)
1237..1560 - ( gc_cont=0.552)
AMDSBA5_92_4
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1685..2359)
DNA (675bp) protein (225aa)
GntR family transcriptional regulator
Putative transcriptional regulator protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EFY7_9RHOB (db=UNIREF evalue=2.5e-12 bit_score=78.2 identity=27.4 coverage=91.11111111111111)
(db=HMMPfam db_id=PF07729 from=93 to=207 evalue=7.7e-19 interpro_id=IPR011711 interpro_description=GntR, C-terminal)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=7 to=107 evalue=8.3e-17)
AMDSBA5_92_5
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2574..3521
DNA (948bp) protein (316aa)
putative permease, DMT superfamily
EamA-like transporter family protein n=3 Tax=Lactobacillus RepID=G7UXE2_LACRH (db=UNIREF evalue=7.2e-50 bit_score=203.4 identity=38.1 coverage=89.87341772151899)
transmembrane_regions (db=TMHMM db_id=tmhmm from=179 to=196)
transmembrane_regions (db=TMHMM db_id=tmhmm from=203 to=225)
AMDSBA5_92_6
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

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3543..4430
DNA (888bp) protein (296aa)
cysteine synthase
Cysteine synthase n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8YXP3_NOSS1 (db=UNIREF evalue=2.9e-40 bit_score=171.4 identity=39.9 coverage=90.2027027027027)
seg (db=Seg db_id=seg from=280 to=290)
CYS_SYNTHASE (db=PatternScan db_id=PS00901 from=46 to=64 evalue=0.0 interpro_id=IPR001216 interpro_description=Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site GO=Biological Process: cysteine biosynthetic process from serine (GO:0006535))
AMDSBA5_92_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4469..4633)
DNA (165bp) protein (55aa)
transposase
Transposase IS116/IS110/IS902 family protein n=9 Tax=Sulfobacillus acidophilus RepID=G8TZW9_9FIRM (db=UNIREF evalue=2.4e-17 bit_score=92.8 identity=89.1 coverage=96.36363636363636)
Transposase {ECO:0000313|EMBL:AEJ41792.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus aci
Displaying 7 items

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