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AMDSBA5_93

Alias: AMDSBA5_C92

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Displaying 9 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_93_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..479)
DNA (477bp) protein (159aa)
amino acid permease-associated protein
Amino acid transporter n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C1D6_9CREN (db=UNIREF evalue=1.1e-30 bit_score=138.7 identity=44.4 coverage=94.9685534591195)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
AMDSBA5_93_2
unknown

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comp(648..1766)
DNA (1119bp) protein (373aa)
coiled-coil (db=Coil db_id=coil from=226 to=247 evalue=NA)
AMDSBA5_93_3
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(1837..2367)
DNA (531bp) protein (177aa)
hydrogenase maturation protease
Hydrogenase maturation protease n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XLH2_9PSEU (db=UNIREF evalue=4.7e-22 bit_score=110.2 identity=42.7 coverage=79.66101694915254)
HybD-like (db=superfamily db_id=SSF53163 from=7 to=172 evalue=3.5e-28 interpro_id=IPR023430 interpro_description=Peptidase HybD-like domain)
hydrog_prot: hydrogenase maturation prote (db=HMMTigr db_id=TIGR00072 from=10 to=159 evalue=5.0e-26 interpro_id=IPR000671 interpro_description=Peptidase A31, hydrogen uptake protein GO=Molecular Function: enzyme activator activity (GO:0008047), Molecular Function: peptidase activity (GO:0008233))
AMDSBA5_93_4
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(2364..2678)
DNA (315bp) protein (105aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CAW1_SPHTD (db=UNIREF evalue=1.6e-14 bit_score=84.3 identity=47.6 coverage=77.14285714285715)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ED25_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF82587.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
AMDSBA5_93_5
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(2671..3651)
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1X4_THERP (db=UNIREF evalue=1.1e-08 bit_score=66.6 identity=36.4 coverage=31.804281345565748)
seg (db=Seg db_id=seg from=82 to=92)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU38497.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC B
AMDSBA5_93_6
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(3656..4306)
DNA (651bp) protein (217aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CIE1_MYCTH (db=UNIREF evalue=1.0e-39 bit_score=169.1 identity=43.5 coverage=94.93087557603687)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ED24_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF82586.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
AMDSBA5_93_7
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(4303..4923)
DNA (621bp) protein (207aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAR7_9BACT (db=UNIREF evalue=3.1e-25 bit_score=120.9 identity=34.8 coverage=93.71980676328504)
Uncharacterized protein {ECO:0000313|EMBL:AEU38495.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC B
AMDSBA5_93_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4936..5826)
DNA (891bp) protein (297aa)
NifU-like domain protein n=1 Tax=Methanosaeta concilii GP6 RepID=F4BUV2_METCG (db=UNIREF evalue=5.4e-07 bit_score=60.8 identity=41.9 coverage=20.53872053872054)
Fe-S cluster assembly (FSCA) domain-like (db=superfamily db_id=SSF117916 from=79 to=166 evalue=2.0e-20)
(db=HMMPfam db_id=PF01106 from=90 to=149 evalue=1.5e-15 interpro_id=IPR001075 interpro_description=NIF system FeS cluster assembly, NifU, C-terminal GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: iron-sulfur cluster assembly (GO:0016226), Molecular Function: iron-sulfur cluster binding (GO:0051536))
IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED (db=HMMPanther db_id=PTHR11178 from=87 to=155 evalue=7.0e-11)
AMDSBA5_93_9
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5896..6315)
DNA (420bp) protein (140aa)
hydrogenase nickel incorporation protein HypB
Hydrogenase accessory protein HypB n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HX74_9RHIZ (db=UNIREF evalue=4.6e-33 bit_score=146.4 identity=52.2 coverage=96.42857142857143)
(db=HMMPfam db_id=PF02492 from=1 to=104 evalue=2.4e-23 interpro_id=IPR003495 interpro_description=Cobalamin (vitamin B12) biosynthesis CobW-like)
hypB: hydrogenase accessory protein HypB (db=HMMTigr db_id=TIGR00073 from=1 to=126 evalue=6.4e-59 interpro_id=IPR004392 interpro_description=Hydrogenase accessory protein HypB GO=Biological Process: protein complex assembly (GO:0006461), Molecular Function: nickel ion binding (GO:0016151))
Displaying 9 items

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