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AMDSBA5_94

Alias: AMDSBA5_C93

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_94_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..92)
DNA (90bp) protein (30aa)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=30 evalue=1.0e-11 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
(db=HMMPfam db_id=PF00436 from=2 to=30 evalue=1.6e-09 interpro_id=IPR000424 interpro_description=Primosome PriB/single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697))
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=2 to=30 evalue=5.7e-07 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
SSB (db=ProfileScan db_id=PS50935 from=1 to=30 evalue=15.44 interpro_id=IPR000424 interpro_description=Primosome PriB/single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697))
AMDSBA5_94_2
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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604..2190
DNA (1587bp) protein (529aa)
seg (db=Seg db_id=seg from=275 to=289)
seg (db=Seg db_id=seg from=4 to=21)
seg (db=Seg db_id=seg from=323 to=333)
(db=HMMPfam db_id=PF07282 from=377 to=437 evalue=2.6e-08 interpro_id=IPR010095 interpro_description=Transposase IS605, OrfB, C-terminal)
AMDSBA5_94_3
unknown

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comp(2362..4059)
DNA (1698bp) protein (566aa)
seg (db=Seg db_id=seg from=346 to=361)
seg (db=Seg db_id=seg from=112 to=121)
seg (db=Seg db_id=seg from=518 to=528)
seg (db=Seg db_id=seg from=548 to=561)
AMDSBA5_94_4
unknown

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comp(4010..5332)
DNA (1323bp) protein (441aa)
seg (db=Seg db_id=seg from=346 to=361)
seg (db=Seg db_id=seg from=318 to=330)
seg (db=Seg db_id=seg from=248 to=264)
AMDSBA5_94_5
unknown

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5334..5471
DNA (138bp) protein (46aa)
5334..5471 + ( gc_cont=0.558)
Displaying 5 items

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