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AMDSBA5_98

Alias: AMDSBA5_C97

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_98_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..270)
DNA (270bp) protein (90aa)
invertase/recombinase-like protein
Resolvase-like protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P0T1_9RHOB (db=UNIREF evalue=2.6e-13 bit_score=80.1 identity=51.6 coverage=98.88888888888889)
RECOMBINASES_2 (db=PatternScan db_id=PS00398 from=55 to=67 evalue=0.0 interpro_id=IPR006118 interpro_description=Recombinase, conserved site GO=Molecular Function: recombinase activity (GO:0000150), Biological Process: DNA recombination (GO:0006310))
RECOMBINASES_1 (db=PatternScan db_id=PS00397 from=5 to=13 evalue=0.0 interpro_id=IPR006118 interpro_description=Recombinase, conserved site GO=Molecular Function: recombinase activity (GO:0000150), Biological Process: DNA recombination (GO:0006310))
AMDSBA5_98_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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874..1059
DNA (186bp) protein (62aa)
regulatory protein MerR
MerR family transcriptional regulator n=2 Tax=Sulfobacillus acidophilus RepID=F8I6F1_SULAT
MerR family transcriptional regulator {ECO:0000313|EMBL:AEJ38631.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;"
AMDSBA5_98_3
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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1476..2558
DNA (1083bp) protein (361aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VIL0_9CYAN (db=UNIREF evalue=4.5e-80 bit_score=303.9 identity=45.9 coverage=98.89196675900277)
seg (db=Seg db_id=seg from=336 to=355)
seg (db=Seg db_id=seg from=103 to=123)
AMDSBA5_98_4
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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2777..3868
DNA (1092bp) protein (364aa)
Putative Modification methylase XorII n=1 Tax=Microcystis aeruginosa PCC 9701 RepID=I4IV05_MICAE (db=UNIREF evalue=8.8e-100 bit_score=369.4 identity=55.1 coverage=87.91208791208791)
DNA-cytosine methyltransferase
seg (db=Seg db_id=seg from=43 to=58)
AMDSBA5_98_5
unknown

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3887..4099
DNA (213bp) protein (71aa)
3887..4099 + ( gc_cont=0.568)
AMDSBA5_98_6
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3996..4268)
DNA (273bp) protein (91aa)
hypothetical protein (db=KEGG evalue=9.8e-08 bit_score=61.2 identity=42.9 coverage=81.31868131868131)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CQN8_DESK7 (db=UNIREF evalue=1.3e-07 bit_score=61.2 identity=42.9 coverage=81.31868131868131)
seg (db=Seg db_id=seg from=22 to=35)
AMDSBA5_98_7
unknown

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comp(4401..4799)
DNA (399bp) protein (133aa)
4401..4799 - ( gc_cont=0.586)
AMDSBA5_98_8
unknown

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comp(4870..5157)
DNA (288bp) protein (96aa)
seg (db=Seg db_id=seg from=10 to=21)
seg (db=Seg db_id=seg from=31 to=44)
AMDSBA5_98_9
unknown

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comp(5162..5350)
DNA (189bp) protein (63aa)
seg (db=Seg db_id=seg from=34 to=54)
AMDSBA5_98_10
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5424..5594)
DNA (171bp) protein (57aa)
(db=HMMPfam db_id=PF00196 from=3 to=47 evalue=1.8e-08 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=4 to=46 evalue=8.4e-07 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: reg
RNA polymerase sigma-30 factor (Sigma(H)) n=1 Tax=Clostridium ultunense Esp RepID=M1YUP3_9CLOT
Displaying 10 items

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