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AMDSBA5_109

Alias: AMDSBA5_C108

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA5_109_1
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(625..1074)
-----------------
DNA (450bp)
protein (150aa)
hypothetical protein
hypothetical protein Faci_06399 n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI0001B4170B (db=UNIREF evalue=3.0e-14 bit_score=84.0 identity=35.0 coverage=86.66666666666667)
transmembrane_regions (db=TMHMM db_id=tmhmm from=127 to=144)
transmembrane_regions (db=TMHMM db_id=tmhmm from=95 to=117)
AMDSBA5_109_2
unknown

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1265..1921
-----------------
DNA (657bp)
protein (219aa)
1265..1921 + ( gc_cont=0.565)
AMDSBA5_109_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1989..2195)
-----------------
DNA (207bp)
protein (69aa)
HMA_1 (db=PatternScan db_id=PS01047 from=8 to=37 evalue=0.0 interpro_id=IPR017969 interpro_description=Heavy-metal-associated, conserved site GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
HMA, heavy metal-associated domain (db=superfamily db_id=SSF55008 from=1 to=68 evalue=4.1e-19 interpro_id=IPR006121 interpro_description=Heavy metal-associated domain, HMA GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
TIGR00003: copper ion binding protein (db=HMMTigr db_id=TIGR00003 from=3 to=68 evalue=1.5e-16 interpro_id=IPR006122 interpro_description=Heavy metal-associated domain, copper ion-binding GO=Molecular Function: copper ion binding (GO:0005507), Biological Process: copper ion transport (GO:0006825))
no description (db=Gene3D db_id=G3DSA:3.30.70.100 from=1 to=67 evalue=9.5e-16)
AMDSBA5_109_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2237..3157)
-----------------
DNA (921bp)
protein (307aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=244 to=263)
transmembrane_regions (db=TMHMM db_id=tmhmm from=267 to=286)
seg (db=Seg db_id=seg from=112 to=123)
seg (db=Seg db_id=seg from=275 to=280)
AMDSBA5_109_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3100..3912)
-----------------
DNA (813bp)
protein (271aa)
copA; copper-translocating P-type ATPase
Predicted protein n=1 Tax=Trichoderma reesei QM6a RepID=G0RS27_HYPJQ (db=UNIREF evalue=3.0e-44 bit_score=184.5 identity=39.8 coverage=97.41697416974169)
seg (db=Seg db_id=seg from=186 to=205)
transmembrane_regions (db=TMHMM db_id=tmhmm from=183 to=205)
Displaying 5 items

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