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AMDSBA5_114

Alias: AMDSBA5_C113

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA5_114_1
Caldisphaera lagunensis, Caldisphaera, Acidilobales, Thermoprotei, Crenarchaeota, Archaea

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1..441
-----------------
DNA (441bp)
protein (147aa)
gamma-aminobutyrate permease
Amino acid permease n=57 Tax=Burkholderia RepID=A5JAJ1_BURML (db=UNIREF evalue=5.2e-19 bit_score=99.8 identity=37.5 coverage=94.5578231292517)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=61)
transmembrane_regions (db=TMHMM db_id=tmhmm from=16 to=38)
AMDSBA5_114_2
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(651..1343)
-----------------
DNA (693bp)
protein (231aa)
Putative uncharacterized protein n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DUS7_9BACL (db=UNIREF evalue=7.7e-33 bit_score=146.4 identity=38.1 coverage=93.93939393939394)
N-terminal nucleophile aminohydrolases (Ntn hydrolases) (db=superfamily db_id=SSF56235 from=2 to=209 evalue=2.7e-25)
no description (db=Gene3D db_id=G3DSA:3.60.20.10 from=1 to=177 evalue=7.1e-12)
GATASE_TYPE_2 (db=ProfileScan db_id=PS51278 from=2 to=230 evalue=16.286 interpro_id=IPR017932 interpro_description=Glutamine amidotransferase, type II)
AMDSBA5_114_3
Thermus sp. NMX2.A1, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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1562..2317
-----------------
DNA (756bp)
protein (252aa)
IclR family transcriptional regulator
Pectin degradation repressor protein kdgR n=51 Tax=Enterobacteriaceae RepID=KDGR_ERWCH (db=UNIREF evalue=6.9e-27 bit_score=126.7 identity=30.7 coverage=97.61904761904762)
GAF domain-like (db=superfamily db_id=SSF55781 from=69 to=247 evalue=9.6e-47)
no description (db=Gene3D db_id=G3DSA:3.30.450.40 from=79 to=249 evalue=8.5e-45)
AMDSBA5_114_4
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

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2319..2765
-----------------
DNA (447bp)
protein (149aa)
cupin
RmlC-like cupins (db=superfamily db_id=SSF51182 from=27 to=140 evalue=1.5e-20 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
(db=HMMPfam db_id=PF07883 from=60 to=127 evalue=1.2e-14 interpro_id=IPR013096 interpro_description=Cupin 2, conserved barrel)
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=7 to=134 evalue=6.1e-10 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
AMDSBA5_114_5
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2844..4364
-----------------
DNA (1521bp)
protein (507aa)
two component transcriptional regulator, winged helix family
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=241 evalue=3.8e-68)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=4 to=242 evalue=4.6e-62 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: nucleotide binding (GO:0000166))
SHORT-CHAIN DEHYDROGENASES/REDUCTASE FAMILY MEMBER (db=HMMPanther db_id=PTHR19410 from=3 to=240 evalue=1.2e-61)
AMDSBA5_114_6
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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4371..5753
-----------------
DNA (1383bp)
protein (461aa)
signal transduction histidine kinase
AtoS n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D9U2_LARHH (db=UNIREF evalue=3.3e-11 bit_score=75.5 identity=25.9 coverage=49.240780911062906)
seg (db=Seg db_id=seg from=9 to=36)
seg (db=Seg db_id=seg from=178 to=190)
AMDSBA5_114_7
unknown

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5909..6214
-----------------
DNA (306bp)
protein (102aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
Displaying 7 items

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