ggKbase home page

AMDSBA5_119

Alias: AMDSBA5_C118

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA5_119_1
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3..146)
-----------------
DNA (144bp)
protein (48aa)
Ferritin-like (db=superfamily db_id=SSF47240 from=2 to=48 evalue=8.1e-07 interpro_id=IPR009078 interpro_description=Ferritin/ribonucleotide reductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: transition metal ion binding (GO:0046914), Biological Process: oxidation-reduction process (GO:0055114))
no description (db=Gene3D db_id=G3DSA:1.20.1260.10 from=3 to=48 evalue=0.00017 interpro_id=IPR012347 interpro_description=Ferritin-related)
ferritin Dps family protein
AMDSBA5_119_2
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(298..1725)
-----------------
DNA (1428bp)
protein (476aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=130 to=147)
transmembrane_regions (db=TMHMM db_id=tmhmm from=157 to=179)
transmembrane_regions (db=TMHMM db_id=tmhmm from=192 to=214)
transmembrane_regions (db=TMHMM db_id=tmhmm from=224 to=246)
AMDSBA5_119_3
unknown

Not on your lists

comp(2014..2451)
-----------------
DNA (438bp)
protein (146aa)
seg (db=Seg db_id=seg from=10 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
AMDSBA5_119_4
unknown

Not on your lists

2553..2834
-----------------
DNA (282bp)
protein (94aa)
seg (db=Seg db_id=seg from=77 to=90)
seg (db=Seg db_id=seg from=58 to=75)
seg (db=Seg db_id=seg from=36 to=51)
seg (db=Seg db_id=seg from=5 to=21)
AMDSBA5_119_5
unknown

Not on your lists

comp(2748..3368)
-----------------
DNA (621bp)
protein (207aa)
seg (db=Seg db_id=seg from=4 to=17)
seg (db=Seg db_id=seg from=182 to=195)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA5_119_6
GWA1_OP11_40_24_partial, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(3365..3946)
-----------------
DNA (582bp)
protein (194aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=163 to=180)
transmembrane_regions (db=TMHMM db_id=tmhmm from=142 to=159)
transmembrane_regions (db=TMHMM db_id=tmhmm from=54 to=76)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=44)
AMDSBA5_119_7
unknown

Not on your lists

comp(4052..4276)
-----------------
DNA (225bp)
protein (75aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=63)
AMDSBA5_119_8
unknown

Not on your lists

comp(4489..5124)
-----------------
DNA (636bp)
protein (212aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=198 to=209)
seg (db=Seg db_id=seg from=2 to=44)
Displaying 8 items

View Taxonomy