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AMDSBA5_130

Alias: AMDSBA5_C129

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_130_1
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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100..1443
DNA (1344bp) protein (448aa)
glutamate--putrescine ligase (EC:6.3.1.11)
Glutamine synthetase n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GFU2_METPE (db=UNIREF evalue=4.2e-59 bit_score=234.6 identity=34.5 coverage=95.53571428571429)
seg (db=Seg db_id=seg from=131 to=142)
seg (db=Seg db_id=seg from=66 to=76)
AMDSBA5_130_2
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1456..1704
DNA (249bp) protein (83aa)
AhpD-like (db=superfamily db_id=SSF69118 from=1 to=82 evalue=8.9e-13)
(db=HMMPfam db_id=PF02627 from=50 to=82 evalue=3.9e-07 interpro_id=IPR003779 interpro_description=Carboxymuconolactone decarboxylase GO=Molecular Function: peroxiredoxin activity (GO:0051920), Biological Process: oxidation-reduction process (GO:0055114))
no description (db=Gene3D db_id=G3DSA:1.20.1290.10 from=31 to=82 evalue=1.2e-06)
alkylhydroperoxidase Tax=RBG_16_Deltaproteobacteria_58_17_curated
AMDSBA5_130_3

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1967..2416
DNA (450bp) protein (150aa)
gamma-aminobutyrate permease
transmembrane_regions (db=TMHMM db_id=tmhmm from=99 to=121)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=78)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
AMDSBA5_130_4

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2413..2619
DNA (207bp) protein (69aa)
seg (db=Seg db_id=seg from=24 to=40)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
AMINO ACID TRANSPORTER (db=HMMPanther db_id=PTHR11785 from=1 to=69 evalue=2.1e-06 interpro_id=IPR002293 interpro_description=Amino acid/polyamine transporter I GO=Biological Process: amino acid transmembrane transport (GO:0003333), Molecular Function: amino acid transmembrane transporter activity (GO:0015171), Cellular Component: membrane (GO:0016020))
Amino acid permease {ECO:0000313|EMBL:EQD40405.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Displaying 4 items

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