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AMDSBA5_3_11

Organism: S._thermosulfido._IM5

near complete RP 51 / 55 MC: 14 BSCG 51 / 51 MC: 1 ASCG 0 / 38
Location: comp(9194..9814)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-30 subunit SigH similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 204.0
  • Bit_score: 165
  • Evalue 1.70e-38
RNA polymerase sigma-H factor n=29 Tax=Bacillus RepID=RPSH_BACLI (db=UNIREF evalue=3.9e-36 bit_score=157.1 identity=41.4 coverage=91.78743961352657) similarity UNIREF
DB: UNIREF
  • Identity: 41.4
  • Coverage: 91.79
  • Bit_score: 157
  • Evalue 3.90e-36
seg (db=Seg db_id=seg from=149 to=161) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Clostridium sp. CAG:226 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 621
ATGGCGGCTTCGGTGGCTTCACAGGCTCGCGTATCGGATGATGAATTATTGTTACGTGATCGGCAAGGTGATAGTGATGCCATGGAGGAATTATTACTTCGATACCAAGGCCTAGTTGCCGCTAAAGCCCGGTCGTATTTTGTCGTGGGGTTGGATCATGATGATCTTCAACAAGAAGGTATGCTGGGATTGTTTTATGCCATCCGTCATTTTCGTTGGGAACAGGGTGTACCTTTTCAGGCATTTGCGGATCTCTGCGTTAGTCGACGCATTATCAGTGCCGTAATTCGGGCGACGCGAAAAAAACAGCAACCATTAAACACGGCATTTTCGTTGTATCAAACAACATCGGAAGAGCCAGACGGACAACTCTTTATTGGAAAACTGGAAGATCATAAGGCCATGAACCCCGAACATTGGGTAATGGAACAAGAAAACCAGGAACGCTGGACCACGTTATTACGACGTCGCTTGACAACATTGGAGCAAGATGTGCTCCATCTGTATTTATCAGGATTTACCTATCAACAAATTGCTCGAAAACTCGGCCGCACGCCAAAGTCGGTCGATAATGCGCTTCAACGCATTCGGGCAAAAGCCAGTTTTGCCTTTAAACACTGA
PROTEIN sequence
Length: 207
MAASVASQARVSDDELLLRDRQGDSDAMEELLLRYQGLVAAKARSYFVVGLDHDDLQQEGMLGLFYAIRHFRWEQGVPFQAFADLCVSRRIISAVIRATRKKQQPLNTAFSLYQTTSEEPDGQLFIGKLEDHKAMNPEHWVMEQENQERWTTLLRRRLTTLEQDVLHLYLSGFTYQQIARKLGRTPKSVDNALQRIRAKASFAFKH*