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AMDSBA5_12_14

Organism: S._thermosulfido._IM5

near complete RP 51 / 55 MC: 14 BSCG 51 / 51 MC: 1 ASCG 0 / 38
Location: comp(11214..12101)

Top 3 Functional Annotations

Value Algorithm Source
rluB; pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 295.0
  • Bit_score: 346
  • Evalue 6.00e-93
  • rbh
Pseudouridine synthase n=1 Tax=Desulfotomaculum ruminis DSM 2154 RepID=F6DT72_DESRL (db=UNIREF evalue=5.7e-49 bit_score=200.3 identity=38.1 coverage=95.6081081081081) similarity UNIREF
DB: UNIREF
  • Identity: 38.1
  • Coverage: 95.61
  • Bit_score: 200
  • Evalue 5.70e-49
PSI_RSU (db=PatternScan db_id=PS01149 from=101 to=115 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 888
ATGAATTCCCGTCTACAAAAAGTTATAGCGCAAGCCGGACTCTGTTCGCGGCGTGAAGCGGAAACATGGATTGATGCAGGAAGGGTCCTCGTCAACGGTCAGAAGGCACATTTGGGTCAAGTGGTAGACCCAGAGACCGATCAAATTGTCGTGGACGGCCGTCCCCTTCAACTCAAAACCGAACGAACCTATTTAATCCTCAATAAGCCGGTAGGTTATACCACTTCGCTGAAAGACCGTCACGCGGAGCATCTAATTTCTGAGCTCGTGCCCGCTCGATTCGGGCGAGTTTTTCCTGTGGGCCGTCTCGACAAAGAGACATCGGGTCTCATCATTATGACCAATGATGGGTTGTTGGCGCATCATCTAATGCATCCGTCGTATGCCGTACCTAAAGTTTACGAGGCATGGGTTCAAGGCGTTCCTCGACGCAATCATCTGTTGCGATTGGAAAAAGGCATTCAACTGGATGACGGATATGCCCATCCCCAAGACATTAAAATTCTTCGGACTGAAAACAACAATGCGCTGTTTCGTCTGACGTTGACAGAAGGGCGAAAACGGGAAGTTCGGCGAATCTTTGAGGCCATCGGCCATCCCGTCTTGTCCTTAAAACGGATCGCCTTTGGACCGTTATCATTGGAAGGCCTTGAAGAGGGGCAATTTCGACCGTTGACACACCGCGAAGTCAAGGCATTATATAGCATGGTGGAAACTGCACGGCAAAAGAATTCCAGGAATCGAAGGGATGACCAATCGAATGACTTCACCAAATCCAGATTTACAGCACGTGGTATCAAGCGTCCAGGCCGTTCAACAATACCAGCCGTCCCCTCGCGGCATTCGCTCAGCCACACCCGAGGAAATTCAGGCCGGAATCACCGCTGA
PROTEIN sequence
Length: 296
MNSRLQKVIAQAGLCSRREAETWIDAGRVLVNGQKAHLGQVVDPETDQIVVDGRPLQLKTERTYLILNKPVGYTTSLKDRHAEHLISELVPARFGRVFPVGRLDKETSGLIIMTNDGLLAHHLMHPSYAVPKVYEAWVQGVPRRNHLLRLEKGIQLDDGYAHPQDIKILRTENNNALFRLTLTEGRKREVRRIFEAIGHPVLSLKRIAFGPLSLEGLEEGQFRPLTHREVKALYSMVETARQKNSRNRRDDQSNDFTKSRFTARGIKRPGRSTIPAVPSRHSLSHTRGNSGRNHR*