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AMDSBA5_12_14 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
rluB; pseudouridine synthase rbh similarity KEGG
DB: KEGG
57.3 295.0 346 6.00e-93 say:TPY_1560
Pseudouridine synthase n=1 Tax=Desulfotomaculum ruminis DSM 2154 RepID=F6DT72_DESRL (db=UNIREF evalue=5.7e-49 bit_score=200.3 identity=38.1 coverage=95.6081081081081) similarity UNIREF
DB: UNIREF
38.1 95.61 200 5.70e-49 say:TPY_1560
PSI_RSU (db=PatternScan db_id=PS01149 from=101 to=115 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) iprscan interpro
DB: PatternScan
null null null 0.0 say:TPY_1560
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600 from=7 to=271 evalue=4.3e-70) iprscan interpro
DB: HMMPanther
null null null 4.30e-70 say:TPY_1560
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600:SF2 from=7 to=271 evalue=4.3e-70) iprscan interpro
DB: HMMPanther
null null null 4.30e-70 say:TPY_1560
TIGR00093: pseudouridine synthase (db=HMMTigr db_id=TIGR00093 from=68 to=227 evalue=3.3e-55 interpro_id=IPR000748 interpro_description=Pseudouridine synthase, RsuA/RluB/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) iprscan interpro
DB: HMMTigr
null null null 3.30e-55 say:TPY_1560
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=46 to=254 evalue=1.1e-43 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
null null null 1.09e-43 say:TPY_1560
(db=HMMPfam db_id=PF00849 from=64 to=195 evalue=2.7e-18 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMPfam
null null null 2.70e-18 say:TPY_1560
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=3 to=69 evalue=4.4e-14) iprscan interpro
DB: superfamily
null null null 4.40e-14 say:TPY_1560
(db=HMMPfam db_id=PF01479 from=4 to=44 evalue=5.4e-12 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
null null null 5.40e-12 say:TPY_1560
no description (db=HMMSmart db_id=SM00363 from=3 to=66 evalue=2.7e-11 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart
null null null 2.70e-11 say:TPY_1560
S4 (db=ProfileScan db_id=PS50889 from=3 to=69 evalue=14.749 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
null null null 1.47e+01 say:TPY_1560
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. UNIPROT
DB: UniProtKB
57.3 295.0 346 3.00e-92 F8I594_SULAT