| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| rluB; pseudouridine synthase rbh | similarity |
KEGG
DB: KEGG |
57.3 | 295.0 | 346 | 6.00e-93 | say:TPY_1560 |
| Pseudouridine synthase n=1 Tax=Desulfotomaculum ruminis DSM 2154 RepID=F6DT72_DESRL (db=UNIREF evalue=5.7e-49 bit_score=200.3 identity=38.1 coverage=95.6081081081081) | similarity |
UNIREF
DB: UNIREF |
38.1 | 95.61 | 200 | 5.70e-49 | say:TPY_1560 |
| PSI_RSU (db=PatternScan db_id=PS01149 from=101 to=115 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | say:TPY_1560 |
| RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600 from=7 to=271 evalue=4.3e-70) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 4.30e-70 | say:TPY_1560 |
| RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600:SF2 from=7 to=271 evalue=4.3e-70) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 4.30e-70 | say:TPY_1560 |
| TIGR00093: pseudouridine synthase (db=HMMTigr db_id=TIGR00093 from=68 to=227 evalue=3.3e-55 interpro_id=IPR000748 interpro_description=Pseudouridine synthase, RsuA/RluB/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 3.30e-55 | say:TPY_1560 |
| Pseudouridine synthase (db=superfamily db_id=SSF55120 from=46 to=254 evalue=1.1e-43 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.09e-43 | say:TPY_1560 |
| (db=HMMPfam db_id=PF00849 from=64 to=195 evalue=2.7e-18 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.70e-18 | say:TPY_1560 |
| Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=3 to=69 evalue=4.4e-14) | iprscan |
interpro
DB: superfamily |
null | null | null | 4.40e-14 | say:TPY_1560 |
| (db=HMMPfam db_id=PF01479 from=4 to=44 evalue=5.4e-12 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 5.40e-12 | say:TPY_1560 |
| no description (db=HMMSmart db_id=SM00363 from=3 to=66 evalue=2.7e-11 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 2.70e-11 | say:TPY_1560 |
| S4 (db=ProfileScan db_id=PS50889 from=3 to=69 evalue=14.749 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.47e+01 | say:TPY_1560 |
| Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. |
UNIPROT
DB: UniProtKB |
57.3 | 295.0 | 346 | 3.00e-92 | F8I594_SULAT |