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AMDSBA5_25_11

Organism: S._thermosulfido._IM5

near complete RP 51 / 55 MC: 14 BSCG 51 / 51 MC: 1 ASCG 0 / 38
Location: comp(9976..10767)

Top 3 Functional Annotations

Value Algorithm Source
DeoR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 235.0
  • Bit_score: 161
  • Evalue 2.50e-37
DeoR-family transcriptional regulator n=1 Tax=Arthrobacter arilaitensis Re117 RepID=E1W0Z2_ARTAR (db=UNIREF evalue=5.5e-27 bit_score=127.1 identity=32.2 coverage=95.07575757575758) similarity UNIREF
DB: UNIREF
  • Identity: 32.2
  • Coverage: 95.08
  • Bit_score: 127
  • Evalue 5.50e-27
HTH_DEOR_1 (db=PatternScan db_id=PS00894 from=6 to=40 evalue=0.0 interpro_id=IPR018356 interpro_description=Transcription regulator, HTH DeoR-type, conserved site GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

Sinomonas sp. MUSC 117 → Sinomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGAATCAAGAGCTGAGACGGGCACGCATTGTGGACATAATCATGAAGAATTCGGCAGTCAAAGTTGAGGAACTGGCGCACGAATTACACGCTTCGTTAGCCACTATTCGCCGCGATTTGACATATCTCGAAAAGCAAGGGCAGATTCTGCGCACATTTGGAGGAGCCGTATCAGTACCTTCATCCACGGAGTTGAGTTTGCAGAAACGAGCTTTAACTCATCTCGAGGCCAAAAACCGCATTGCCCAAGCCGCCCTACCGCTACTATTAACGTCGCAAAGTGTCATCTTAGATGCAGGAACAACCACAGGATGTTTAGCGCGTTTAATTCCGAACGATGTGTCTTTGACGGTGATTACTAATGGACTCAATATCCTCATGGATTTGGCTTATCAAGACCAAATCGATTTGATTGCATTAGGAGGAAGTTTGCGCCATCTCAATCAAGCGTTTATTGGTGATAGCGCCATTATGCAGTTACAAACCTATCATGTCGATACCTGCTTTTTGGGGGCTTTTGGACTTGATCCCGGGGTCGGTCTCACCTCACCCACAGCACCCCAAGCGTATTTAAAACGAAAAATGGCGGAAGCAGCCAACAAAGTGTATATCCTCGCCGATAGCAGCAAATTTTCGATCAGCTTTCCGCATGTGACCCCTTTACCCCATGGCGTAACCGTGATAACGGAAAAAGCCGTCGATAGCACTACCGCCAAAAAATTTCATGATAGGCACTGGAACATTGTTTCAGCCGATGAGTTCGTCGATGCGAATCACGAAGGTTCTGCGTAA
PROTEIN sequence
Length: 264
MNQELRRARIVDIIMKNSAVKVEELAHELHASLATIRRDLTYLEKQGQILRTFGGAVSVPSSTELSLQKRALTHLEAKNRIAQAALPLLLTSQSVILDAGTTTGCLARLIPNDVSLTVITNGLNILMDLAYQDQIDLIALGGSLRHLNQAFIGDSAIMQLQTYHVDTCFLGAFGLDPGVGLTSPTAPQAYLKRKMAEAANKVYILADSSKFSISFPHVTPLPHGVTVITEKAVDSTTAKKFHDRHWNIVSADEFVDANHEGSA*