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AMDSBA5_28_3

Organism: S._thermosulfido._IM5

near complete RP 51 / 55 MC: 14 BSCG 51 / 51 MC: 1 ASCG 0 / 38
Location: 2537..3490

Top 3 Functional Annotations

Value Algorithm Source
predicted ABC-type dipeptide/oligopeptide/nickel transport systems, permease component similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 316.0
  • Bit_score: 292
  • Evalue 1.90e-76
ABC-type transport system permease protein (Probable substrate dipeptides/oligopeptides) n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVE8_9EURY (db=UNIREF evalue=1.9e-50 bit_score=205.3 identity=36.3 coverage=99.05660377358491) similarity UNIREF
DB: UNIREF
  • Identity: 36.3
  • Coverage: 99.06
  • Bit_score: 205
  • Evalue 1.90e-50
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Roseomonas cervicalis → Roseomonas → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGACGTTTTATGTTTTCAAGCGCATTAGCCAAAGCCTAATACTGCTATTTCTTGTGTCTGTCACATCGTTTTTTTTAATGCATTTAGCCCCAGGAGGCCCTTTAGCGGTGTATGCACGGAATCCCCATATCACAGCCCACACCTTACATGTGATGGAAATTCGGTTGGGGTTAAACTTACCAATTTGGCAACAATATGTTCGTTGGATCAATGCATGGCTGCATGGGCAATGGGGCTATTCCATTAGTTCCGGTTTGCCTGTTGTAGCAATAATTACCAGTCATTTGGGAGCCACAGGGAGTTTGATGCTTGGTGGCATTATAGTCGCAAGTGTTCTAGGAATTAGTATTGGAACTATTGGTGCTGTAAAACGAAATACGGTGTTTGATTACATCTCTTCGTTTTTTGCGTATATGGTGTGGGCTATGCCAGTGTTTTGGCTTGGCTATGTTCTTCAATTGATCTTTGGCATAGACTTAGGATGGCTTCCCATAGCCGGACAGAGCAATTTCTCTAACCCATCCTTGAAAAGCTTTGTGGTCCATTTAATTCTTCCATCTTTGACATTAGGAGGCGTGTCTGCTGCTGGATGGAGTCGCTATTTACGGTCTAGTCTCGTAGACGTTTTACATCAAGATTATATTCGCACAGCGAAGGCAAAAGGGCTTCCTCCTCGAAGAATTCTTTTGAAACATGCACTGCGTAATGCAATTATCCCACTTTTGACGATTATAGCGCTAGATATTCCCTTCTTTTTCTCGGGCGCTGTTTTGACAGAAATTGTTTTTTCATGGCCTGGTGTTGGACGTTTGTTTTTCGACGCACTTCAATCTCAGGATTATCCTGTTGAGATCTCAGTAATTATGCTTACCGCGATGTTAATTGTGCTTTGTAATTTAGCAGCTGATCTTTTATATGCCGTTATGGATCCGCGGATTCAATACGAGAAATGA
PROTEIN sequence
Length: 318
MTFYVFKRISQSLILLFLVSVTSFFLMHLAPGGPLAVYARNPHITAHTLHVMEIRLGLNLPIWQQYVRWINAWLHGQWGYSISSGLPVVAIITSHLGATGSLMLGGIIVASVLGISIGTIGAVKRNTVFDYISSFFAYMVWAMPVFWLGYVLQLIFGIDLGWLPIAGQSNFSNPSLKSFVVHLILPSLTLGGVSAAGWSRYLRSSLVDVLHQDYIRTAKAKGLPPRRILLKHALRNAIIPLLTIIALDIPFFFSGAVLTEIVFSWPGVGRLFFDALQSQDYPVEISVIMLTAMLIVLCNLAADLLYAVMDPRIQYEK*