ggKbase home page

AMDSBA5_38_14

Organism: S._thermosulfido._IM5

near complete RP 51 / 55 MC: 14 BSCG 51 / 51 MC: 1 ASCG 0 / 38
Location: 13775..14815

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator, LacI family similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 333.0
  • Bit_score: 191
  • Evalue 3.80e-46
Periplasmic binding proteins and sugar binding domain of the LacI family, putative n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WB64_9CAUL (db=UNIREF evalue=3.0e-25 bit_score=121.7 identity=29.0 coverage=94.23631123919309) similarity UNIREF
DB: UNIREF
  • Identity: 29.0
  • Coverage: 94.24
  • Bit_score: 121
  • Evalue 3.00e-25
HTH_LACI_1 (db=PatternScan db_id=PS00356 from=4 to=22 evalue=0.0 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_IG2069_Anaerolineales_43_63 → Anaerolineales → Anaerolineae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1041
ATGTCGACAATGCAAGATGTAGCGAAGCGCGCACATGTGTCTGTGACAACTGTGTCGCGAGTTCTCAATGGGGATAGTCGTGTCAAAGCGGATACACGAGCCCGTGTGGAACGTGTTATGGCAGCTATGGGTTATCAGCCTAACTTGGTAGCTCGGTCCTTGCGGCGGCAATCTAGTCATGTTATTGGCCTCATCGTCGACACATTGGACAATCCGTTTACTGCAGAATTAAGTCAAGCATTAACCGCGCATCTATCTCAGGCTGGCTATCAACTTATTCTGGCAGATACGGAGCGTCAATCACAGCATGGGCCTGCGATGCTTCGTATGTTAGCTCAGCGCGGGGTCGACGGCATACTATTTGCCGCGGGATGGGATAAGGATCCTGAACCATTGGCAGTTGAGTGTGGAATTCTTCAACGAAATGGAATTCCAACAATTATAGTTGGAAACATTCTTCAGTCGGTGCCATCAATTGCTGTTGATCATTATGGTGGAACTCGAAAAGCAGTTGACTATCTCTATCAACTCGGACATAAACATATCGCATTTATAAGTGGAGCTCACGAGACAGAAACTTCACGTCTTCGTCGACAGGGTTTTATTGAAGCCACTCGAACGCTAGGAATTGAGCAGGCCTTAGTTTTTTCATCCTATGGCTCTCCCAAGAGAGCCTCCCAAATAGTCCGTGAACTAGTAAGTTCTTCTCCTCTTATTACGGCGATTGTGGCTGCAAGCGATTATGTTGCTATTGGTGTACTGCATGGTTTATATAACTTAGGTTTGAACGTTCCAAGGGATATGTCGGTTTTTGGATTTGACAATGTAAAAATGAGTCAATTTCTCTGTCCTGCATTAACGACTATTGATGGTGAAATAGACAAACTAGCACATCAAGCATGGACTATGATATACGAGTTGATGCAAGATCCTATGGCACATAATAATCCTGAGGTATTGGCGCCACATGTAGTTGTTCGAGAATCGACCTATAGACCACGAGGATCAAAGTTCATCGAAGTGCCGCATAACACCATATGA
PROTEIN sequence
Length: 347
MSTMQDVAKRAHVSVTTVSRVLNGDSRVKADTRARVERVMAAMGYQPNLVARSLRRQSSHVIGLIVDTLDNPFTAELSQALTAHLSQAGYQLILADTERQSQHGPAMLRMLAQRGVDGILFAAGWDKDPEPLAVECGILQRNGIPTIIVGNILQSVPSIAVDHYGGTRKAVDYLYQLGHKHIAFISGAHETETSRLRRQGFIEATRTLGIEQALVFSSYGSPKRASQIVRELVSSSPLITAIVAASDYVAIGVLHGLYNLGLNVPRDMSVFGFDNVKMSQFLCPALTTIDGEIDKLAHQAWTMIYELMQDPMAHNNPEVLAPHVVVRESTYRPRGSKFIEVPHNTI*