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AMDSBA5_38

Alias: AMDSBA5_C37

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_38_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

234..1463
-----------------
DNA (1230bp)
protein (410aa)
sugar transport permease
Transporter n=1 Tax=Picrophilus torridus DSM 9790 RepID=Q6L0Z6_PICTO (db=UNIREF evalue=5.1e-64 bit_score=250.8 identity=36.8 coverage=93.17073170731707)
seg (db=Seg db_id=seg from=268 to=281)
transmembrane_regions (db=TMHMM db_id=tmhmm from=375 to=397)
AMDSBA5_38_2
unknown

Not on your lists

comp(1588..2097)
-----------------
DNA (510bp)
protein (170aa)
(db=HMMPfam db_id=PF07238 from=54 to=154 evalue=1.8e-08 interpro_id=IPR009875 interpro_description=PilZ domain GO=Molecular Function: cyclic-di-GMP binding (GO:0035438))
PilZ domain-like (db=superfamily db_id=SSF141371 from=48 to=131 evalue=5.6e-06)
AMDSBA5_38_3
unknown

Not on your lists

comp(2087..2248)
-----------------
DNA (162bp)
protein (54aa)
2087..2248 - ( gc_cont=0.414)
AMDSBA5_38_4
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2431..4293)
-----------------
DNA (1863bp)
protein (621aa)
yuxL; peptidase S9 prolyl oligopeptidase active site domain-containing protein
Acylaminoacyl-peptidase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WC30_9SPHN (db=UNIREF evalue=6.2e-29 bit_score=134.8 identity=23.7 coverage=99.35587761674718)
seg (db=Seg db_id=seg from=347 to=358)
ACYLAMINO-ACID-RELEASING ENZYME (db=HMMPanther db_id=PTHR11731:SF7 from=285 to=619 evalue=4.0e-59)
AMDSBA5_38_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4749..5786
-----------------
DNA (1038bp)
protein (346aa)
nucleoside-binding protein
nucleoside-binding protein
Nucleoside-binding protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ42_9FIRM (db=UNIREF evalue=1.2e-162 bit_score=578.2 identity=85.2 coverage=98.84393063583815)
seg (db=Seg db_id=seg from=6 to=41)
AMDSBA5_38_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5837..7360
-----------------
DNA (1524bp)
protein (508aa)
nucleoside ABC transporter ATP-binding protein (EC:3.6.3.17)
Ribose import ATP-binding protein RbsA n=2 Tax=Roseobacter RepID=RBSA_ROSDO (db=UNIREF evalue=5.0e-77 bit_score=294.3 identity=33.5 coverage=96.65354330708661)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=4 to=306 evalue=1.2e-116)
seg (db=Seg db_id=seg from=444 to=459)
AMDSBA5_38_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7357..8472
-----------------
DNA (1116bp)
protein (372aa)
inner-membrane translocator rbh
Ribose ABC transport system permease protein RbsC n=1 Tax=Thermococcus sp. AM4 RepID=B7R1T2_9EURY (db=UNIREF evalue=4.0e-47 bit_score=194.5 identity=35.8 coverage=88.44086021505376)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=310 to=332)
AMDSBA5_38_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8469..9392
-----------------
DNA (924bp)
protein (308aa)
nucleoside ABC transporter membrane protein rbh
Uncharacterized ABC-type transport system, permease component n=1 Tax=Reinekea blandensis MED297 RepID=A4BA14_9GAMM (db=UNIREF evalue=1.2e-60 bit_score=239.2 identity=42.4 coverage=94.8051948051948)
transmembrane_regions (db=TMHMM db_id=tmhmm from=246 to=268)
transmembrane_regions (db=TMHMM db_id=tmhmm from=192 to=214)
AMDSBA5_38_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9404..10300
-----------------
DNA (897bp)
protein (299aa)
pseudouridine-5'-phosphate glycosidase rbh
pseudouridine-5'-phosphate glycosidase rbh
Uncharacterized protein n=1 Tax=Pristionchus pacificus RepID=H3F6D6_PRIPA (db=UNIREF evalue=9.9e-41 bit_score=172.9 identity=41.9 coverage=80.60200668896321)
seg (db=Seg db_id=seg from=277 to=296)
AMDSBA5_38_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10293..11126
-----------------
DNA (834bp)
protein (278aa)
PfkB protein
Ribokinase n=2 Tax=Corynebacterium ulcerans RepID=G0CNJ9_CORUL (db=UNIREF evalue=2.1e-16 bit_score=92.0 identity=28.2 coverage=94.60431654676259)
seg (db=Seg db_id=seg from=111 to=124)
Ribokinase-like (db=superfamily db_id=SSF53613 from=1 to=270 evalue=3.5e-49)
AMDSBA5_38_11
Sulfolobus tokodaii, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(11499..12143)
-----------------
DNA (645bp)
protein (215aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YG64_METS5 (db=UNIREF evalue=6.7e-15 bit_score=86.7 identity=29.7 coverage=80.93023255813954)
Uncharacterized protein {ECO:0000313|EMBL:BAB65667.1}; TaxID=273063 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus tokodaii (strain DSM 16
Uncharacterized protein n=1 Tax=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) RepID=Q974J1_SULTO
AMDSBA5_38_12
Acidiplasma sp. MBA-1, Acidiplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(12147..12875)
-----------------
DNA (729bp)
protein (243aa)
cytosine/purines uracil thiamine allantoin permease
Permease for cytosine/purines uracil thiamine allantoin n=1 Tax=Acidilobus saccharovorans 345-15 RepID=D9Q246_ACIS3 (db=UNIREF evalue=5.2e-32 bit_score=143.7 identity=30.2 coverage=95.88477366255144)
seg (db=Seg db_id=seg from=178 to=190)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
AMDSBA5_38_13
Acidiplasma sp. MBA-1, Acidiplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(12890..13642)
-----------------
DNA (753bp)
protein (251aa)
transporter
Permease for cytosine/purines uracil thiamine allantoin n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8M8Z6_CALMQ (db=UNIREF evalue=6.6e-30 bit_score=136.7 identity=32.4 coverage=93.22709163346613)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=229 to=248)
AMDSBA5_38_14
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

13775..14815
-----------------
DNA (1041bp)
protein (347aa)
transcriptional regulator, LacI family
Periplasmic binding proteins and sugar binding domain of the LacI family, putative n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WB64_9CAUL (db=UNIREF evalue=3.0e-25 bit_score=121.7 identity=29.0 coverage=94.23631123919309)
HTH_LACI_1 (db=PatternScan db_id=PS00356 from=4 to=22 evalue=0.0 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Periplasmic binding protein-like I (db=superfamily db_id=SSF53822 from=60 to=340 evalue=4.9e-66)
AMDSBA5_38_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15331..16908)
-----------------
DNA (1578bp)
protein (526aa)
purine catabolism PurC domain protein
purine catabolism PurC domain protein
Purine catabolism PurC domain protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUS5_9FIRM (db=UNIREF evalue=5.0e-112 bit_score=410.6 identity=43.1 coverage=96.57794676806084)
AMDSBA5_38_16
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17068..17889)
-----------------
DNA (822bp)
protein (274aa)
short-chain dehydrogenase/reductase SDR
3-alpha-hydroxysteroid dehydrogenase/carbonyl reductase n=6 Tax=Comamonas testosteroni RepID=DIDH_COMTE (db=UNIREF evalue=1.6e-08 bit_score=65.9 identity=26.9 coverage=90.14598540145985)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=258 evalue=2.1e-73)
SHORT-CHAIN DEHYDROGENASES/REDUCTASE FAMILY MEMBER (db=HMMPanther db_id=PTHR19410 from=3 to=257 evalue=5.0e-67)
AMDSBA5_38_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17889..19355)
-----------------
DNA (1467bp)
protein (489aa)
NCS1 nucleoside transporter family
NCS1 nucleoside transporter family
Uracil permease n=2 Tax=Sulfobacillus acidophilus RepID=F8I3A2_SULAT (db=UNIREF evalue=6.3e-178 bit_score=629.4 identity=62.6 coverage=94.68302658486708)
seg (db=Seg db_id=seg from=424 to=438)
AMDSBA5_38_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19478..20203
-----------------
DNA (726bp)
protein (242aa)
Asp/Glu/hydantoin racemase
Putative uncharacterized protein n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6Q7W7_PENMQ (db=UNIREF evalue=1.6e-33 bit_score=148.7 identity=33.8 coverage=96.28099173553719)
(db=HMMPfam db_id=PF01177 from=8 to=220 evalue=1.0e-18 interpro_id=IPR015942 interpro_description=Asp/Glu/hydantoin racemase)
Maleate cis-trans isomerase {ECO:0000313|EMBL:EJL79169.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source
AMDSBA5_38_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20336..21709
-----------------
DNA (1374bp)
protein (458aa)
aminotransferase
aminotransferase
Aminotransferase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01P59_SOLUE (db=UNIREF evalue=1.2e-122 bit_score=445.7 identity=52.4 coverage=91.0480349344978)
seg (db=Seg db_id=seg from=429 to=440)
AMDSBA5_38_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21975..22862
-----------------
DNA (888bp)
protein (296aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Beta-ureidopropionase n=7 Tax=Geobacillus RepID=F8CZ87_BACTR (db=UNIREF evalue=4.2e-124 bit_score=449.9 identity=71.5 coverage=98.98648648648648)
AMDSBA5_38_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23020..24354
-----------------
DNA (1335bp)
protein (445aa)
glutamate synthase (NADPH) (EC:1.4.1.13)
Glutamate synthase n=1 Tax=Tetragenococcus halophilus NBRC 12172 RepID=G4L5Z5_TETHN (db=UNIREF evalue=6.1e-63 bit_score=247.3 identity=35.5 coverage=98.42696629213484)
seg (db=Seg db_id=seg from=132 to=142)
seg (db=Seg db_id=seg from=218 to=230)
AMDSBA5_38_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24355..25611
-----------------
DNA (1257bp)
protein (419aa)
dihydroorotate dehydrogenase family protein (EC:1.3.1.2)
dihydroorotate dehydrogenase family protein (EC:1.3.1.2)
Dihydroorotate dehydrogenase 1 n=31 Tax=Burkholderiaceae RepID=A2W5S6_9BURK (db=UNIREF evalue=3.4e-132 bit_score=477.2 identity=55.5 coverage=96.89737470167064)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=378 to=389 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
AMDSBA5_38_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25641..27023
-----------------
DNA (1383bp)
protein (461aa)
dihydropyrimidinase
dihydropyrimidinase
Dihydropyrimidinase n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEF5_9ACTN (db=UNIREF evalue=2.2e-124 bit_score=451.4 identity=48.6 coverage=98.0477223427332)
AMDSBA5_38_24
unknown

Not on your lists

comp(27378..27626)
-----------------
DNA (249bp)
protein (83aa)
seg (db=Seg db_id=seg from=16 to=26)
AMDSBA5_38_25
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

28202..30436
-----------------
DNA (2235bp)
protein (745aa)
Metal dependent phosphohydrolase (fragment)
Metal dependent phosphohydrolase (fragment)
Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDE1_9CLOT (db=UNIREF evalue=5.1e-46 bit_score=191.8 identity=29.0 coverage=83.48993288590604)
seg (db=Seg db_id=seg from=477 to=490)
AMDSBA5_38_26
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30597..31304
-----------------
DNA (708bp)
protein (236aa)
CRISPR-associated protein, Cas5d family
Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SXT8_9FIRM (db=UNIREF evalue=5.6e-31 bit_score=140.2 identity=35.4 coverage=87.28813559322035)
CRISPR-associated protein (db=HMMPIR db_id=PIRSF029950 from=1 to=234 evalue=1.8e-63 interpro_id=IPR010155 interpro_description=CRISPR-associated protein, Cas5d-type)
cas_Cas5d: CRISPR-associated protein Cas5 (db=HMMTigr db_id=TIGR01876 from=4 to=233 evalue=7.2e-41 interpro_id=IPR010155 interpro_description=CRISPR-associated protein, Cas5d-type)
AMDSBA5_38_27
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

31301..32992
-----------------
DNA (1692bp)
protein (564aa)
CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG
CRISPR-associated protein, Csd1 family n=1 Tax=Planctomyces brasiliensis DSM 5305 RepID=F0SHD6_PLABD (db=UNIREF evalue=1.1e-43 bit_score=183.7 identity=28.7 coverage=97.51773049645391)
seg (db=Seg db_id=seg from=436 to=447)
seg (db=Seg db_id=seg from=470 to=485)
AMDSBA5_38_28
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

33007..33975
-----------------
DNA (969bp)
protein (323aa)
CRISPR-associated protein Csd2
CRISPR-associated protein Csd2
CRISPR-associated RAMP protein, Cmr1 family n=1 Tax=Meiothermus silvanus DSM 9946 RepID=D7BJ38_MEISD (db=UNIREF evalue=4.1e-101 bit_score=373.6 identity=60.8 coverage=94.73684210526315)
AMDSBA5_38_29
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

33972..34568
-----------------
DNA (597bp)
protein (199aa)
CRISPR-associated protein Cas4
Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YW90_LYNSP (db=UNIREF evalue=4.3e-32 bit_score=143.7 identity=40.4 coverage=90.45226130653266)
seg (db=Seg db_id=seg from=133 to=136)
cas4: CRISPR-associated protein Cas4 (db=HMMTigr db_id=TIGR00372 from=8 to=185 evalue=5.7e-40 interpro_id=IPR013343 interpro_description=CRISPR-associated protein Cas4)
AMDSBA5_38_30
CG_Mariprof_01, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34614..35636
-----------------
DNA (1023bp)
protein (341aa)
CRISPR-associated protein, Cas1 family
CRISPR-associated endonuclease Cas1 3 n=2 Tax=Rhodospirillum rubrum RepID=CAS1C_RHORT (db=UNIREF evalue=7.6e-21 bit_score=107.1 identity=29.3 coverage=98.24046920821115)
cas1_DVULG: CRISPR-associated endonuclease (db=HMMTigr db_id=TIGR03640 from=2 to=339 evalue=1.5e-176 interpro_id=IPR019856 interpro_description=CRISPR-associated protein Cas1, DVULG subtype)
(db=HMMPfam db_id=PF01867 from=6 to=330 evalue=1.3e-91 interpro_id=IPR002729 interpro_description=CRISPR-associated protein Cas1)
Displaying items 1-30 of 32 in total

View Taxonomy