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AMDSBA5_87_2

Organism: S._thermosulfido._IM5

near complete RP 51 / 55 MC: 14 BSCG 51 / 51 MC: 1 ASCG 0 / 38
Location: 872..1585

Top 3 Functional Annotations

Value Algorithm Source
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=2 to=63 evalue=1.4e-12) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.40e-12
(db=HMMPfam db_id=PF00392 from=7 to=60 evalue=2.4e-11 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.40e-11
Chorismate lyase-like (db=superfamily db_id=SSF64288 from=73 to=231 evalue=6.5e-09) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 6.50e-09

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Taxonomy

Streptomyces scabiei → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGGGCGGGCGTGTGTGGGAAGACGTGGTGGATGTCTTGCGCGGCGAAATTTTATCGGGGAAGTGGGCCCCCGATACCGTGTTGCCATCGCGTAATGAATTAGCGCAGCGGTTTGGGGTGAGCACGTCCGCCATTTCGTTAGCCTATAAGCAATTGATCGCAGAAGGGCTGATTTATACACCCCATGGGCCGCGAGAACGGCGCGTAGTTCCCAGTCTTGGGCGGGTGTCCAATCGGGATACGGAATTTTTGCGGGATCCCGCGTGGCAGCATCCCAATATTCGGACCATACGCATTGAAGCCGTCAGGCCACCCGAGGAAGTCAAAGCGCTCATGCCGGGCAGTGATCGCTTGATTCGGTGGCAATCGCAGCATCGGGATGCCCGAACGATCGTGAGTTTGGTCGAGGGCTGGTATTATCCCGCGACCTGGCTTTGGGATTATGTGGTCAAACCGGATGAGACGTTTTATGCCAAACTCAGTGCCCAGCATGGCGAACCGATAGCCTATTTTGAGGAATGGGTGCAATCGCGCGTGACCACGCCCGACGAACGGCGGCAATTTGAGACAGCCGGGCAATCCGTGCTCCCGATTTTGGATATTCGACGGGTGACCCGGACCACCAGCGACAAAGTGGTAGAAGTCGTGCATTTATTGGATTTAGGCACTCGCTACCGGCTGTATTATCGGGTGCCCTACCGTTCCGAGTCCTAA
PROTEIN sequence
Length: 238
MGGRVWEDVVDVLRGEILSGKWAPDTVLPSRNELAQRFGVSTSAISLAYKQLIAEGLIYTPHGPRERRVVPSLGRVSNRDTEFLRDPAWQHPNIRTIRIEAVRPPEEVKALMPGSDRLIRWQSQHRDARTIVSLVEGWYYPATWLWDYVVKPDETFYAKLSAQHGEPIAYFEEWVQSRVTTPDERRQFETAGQSVLPILDIRRVTRTTSDKVVEVVHLLDLGTRYRLYYRVPYRSES*