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AMDSBA5_87

Alias: AMDSBA5_C86

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA5_87_1
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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238..870
-----------------
DNA (633bp)
protein (211aa)
creatininase
Creatininase n=1 Tax=Pyrobaculum islandicum DSM 4184 RepID=A1RRH9_PYRIL (db=UNIREF evalue=4.4e-11 bit_score=73.9 identity=30.4 coverage=79.62085308056872)
(db=HMMPfam db_id=PF02633 from=4 to=206 evalue=8.7e-43 interpro_id=IPR003785 interpro_description=Creatininase/formamide hydrolase)
Creatininase (db=superfamily db_id=SSF102215 from=4 to=209 evalue=4.1e-34 interpro_id=IPR024087 interpro_description=Creatininase-like domain)
AMDSBA5_87_2
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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872..1585
-----------------
DNA (714bp)
protein (238aa)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=2 to=63 evalue=1.4e-12)
(db=HMMPfam db_id=PF00392 from=7 to=60 evalue=2.4e-11 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Chorismate lyase-like (db=superfamily db_id=SSF64288 from=73 to=231 evalue=6.5e-09)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=4 to=63 evalue=7.8e-09 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
AMDSBA5_87_3
unknown

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1894..3102
-----------------
DNA (1209bp)
protein (403aa)
seg (db=Seg db_id=seg from=4 to=20)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=72 evalue=1.2e-11 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00530 from=8 to=60 evalue=3.1e-11 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
(db=HMMPfam db_id=PF01381 from=9 to=60 evalue=2.6e-08 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
AMDSBA5_87_4
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3800..4924
-----------------
DNA (1125bp)
protein (375aa)
Putative uncharacterized protein orfL2 n=1 Tax=Sulfobacillus thermotolerans RepID=G5CIX3_9FIRM (db=UNIREF evalue=1.0e-18 bit_score=100.1 identity=30.4 coverage=68.26666666666667)
Putative uncharacterized protein orfY1 n=1 Tax=Sulfobacillus thermotolerans RepID=G5CJ39_9FIRM
Displaying 4 items

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