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AMDSBAU_10

Alias: SULFO_OTHER_10

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBAU_10_1
unknown

Not on your lists

1..93
-----------------
DNA (93bp)
protein (31aa)
1..93 + ( gc_cont=0.538)
AMDSBAU_10_2
unknown

Not on your lists

comp(176..340)
-----------------
DNA (165bp)
protein (55aa)
176..340 - ( gc_cont=0.600)
AMDSBAU_10_3
unknown

Not on your lists

comp(374..592)
-----------------
DNA (219bp)
protein (73aa)
374..592 - ( gc_cont=0.616)
AMDSBAU_10_4
unknown

Not on your lists

comp(589..1038)
-----------------
DNA (450bp)
protein (150aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=93)
transmembrane_regions (db=TMHMM db_id=tmhmm from=113 to=135)
AMDSBAU_10_5
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1336..2622)
-----------------
DNA (1287bp)
protein (429aa)
Putative uncharacterized protein orfL60 n=1 Tax=Sulfobacillus thermotolerans RepID=G5CJ31_9FIRM (db=UNIREF evalue=3.8e-37 bit_score=161.8 identity=48.1 coverage=42.89044289044289)
hypothetical protein
seg (db=Seg db_id=seg from=6 to=39)
seg (db=Seg db_id=seg from=256 to=283)
AMDSBAU_10_6
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(4041..4994)
-----------------
DNA (954bp)
protein (318aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2B2_ACIFD (db=UNIREF evalue=3.9e-47 bit_score=194.5 identity=36.0 coverage=98.11320754716981)
seg (db=Seg db_id=seg from=76 to=94)
seg (db=Seg db_id=seg from=140 to=151)
AMDSBAU_10_7
unknown

Not on your lists

comp(5247..5774)
-----------------
DNA (528bp)
protein (176aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=111 to=133)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=64)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
seg (db=Seg db_id=seg from=20 to=37)
AMDSBAU_10_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5988..6608)
-----------------
DNA (621bp)
protein (207aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3B9_CONWI
transmembrane_regions (db=TMHMM db_id=tmhmm from=123 to=145)
transmembrane_regions (db=TMHMM db_id=tmhmm from=176 to=198)
AMDSBAU_10_9
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(6605..6970)
-----------------
DNA (366bp)
protein (122aa)
transcriptional regulator, PadR-like family
Transcriptional regulator, PadR-like family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8Q3_SPHTD (db=UNIREF evalue=6.5e-27 bit_score=125.9 identity=56.5 coverage=86.88524590163934)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=21 to=104 evalue=2.5e-16 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=14 to=113 evalue=4.6e-25)
AMDSBAU_10_10
unknown

Not on your lists

comp(7605..7817)
-----------------
DNA (213bp)
protein (71aa)
7605..7817 - ( gc_cont=0.620)
AMDSBAU_10_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7892..8179)
-----------------
DNA (288bp)
protein (96aa)
isoprenylcysteine carboxyl methyltransferase
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I9Y9_SULAT
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
AMDSBAU_10_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8197..8730)
-----------------
DNA (534bp)
protein (178aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I9Z0_SULAT
seg (db=Seg db_id=seg from=113 to=127)
AMDSBAU_10_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(8731..9573)
-----------------
DNA (843bp)
protein (281aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TRK3_9CHLR
Putative uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TRK3_9CHLR (db=UNIREF evalue=7.5e-103 bit_score=379.4 identity=65.1 coverage=96.44128113879003)
hypothetical protein
hypothetical protein
AMDSBAU_10_14
unknown

Not on your lists

comp(9642..10274)
-----------------
DNA (633bp)
protein (211aa)
9642..10274 - ( gc_cont=0.632)
AMDSBAU_10_15
unknown

Not on your lists

comp(10450..11085)
-----------------
DNA (636bp)
protein (212aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=122 to=141)
transmembrane_regions (db=TMHMM db_id=tmhmm from=95 to=117)
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=74)
seg (db=Seg db_id=seg from=128 to=139)
AMDSBAU_10_16
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11150..11833)
-----------------
DNA (684bp)
protein (228aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GGT5_METPE (db=UNIREF evalue=6.7e-41 bit_score=173.3 identity=47.1 coverage=78.94736842105263)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=75 to=97)
AMDSBAU_10_17
unknown

Not on your lists

12476..12655
-----------------
DNA (180bp)
protein (60aa)
seg (db=Seg db_id=seg from=34 to=49)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
AMDSBAU_10_18
unknown

Not on your lists

12713..13054
-----------------
DNA (342bp)
protein (114aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
transmembrane_regions (db=TMHMM db_id=tmhmm from=93 to=112)
AMDSBAU_10_19
unknown

Not on your lists

13054..13404
-----------------
DNA (351bp)
protein (117aa)
13054..13404 + ( gc_cont=0.467)
AMDSBAU_10_20
unknown

Not on your lists

comp(13413..13601)
-----------------
DNA (189bp)
protein (63aa)
13413..13601 - ( gc_cont=0.471)
AMDSBAU_10_21
unknown

Not on your lists

comp(13723..14331)
-----------------
DNA (609bp)
protein (203aa)
13723..14331 - ( gc_cont=0.524)
AMDSBAU_10_22
unknown

Not on your lists

comp(14363..15154)
-----------------
DNA (792bp)
protein (264aa)
seg (db=Seg db_id=seg from=245 to=260)
transmembrane_regions (db=TMHMM db_id=tmhmm from=158 to=180)
transmembrane_regions (db=TMHMM db_id=tmhmm from=190 to=212)
AMDSBAU_10_23
unknown

Not on your lists

comp(15205..15513)
-----------------
DNA (309bp)
protein (103aa)
seg (db=Seg db_id=seg from=87 to=99)
AMDSBAU_10_24
Trabulsiella guamensis, Trabulsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15619..15816
-----------------
DNA (198bp)
protein (66aa)
Uncharacterized protein n=2 Tax=Bacillus cereus RepID=J8DNU4_BACCE (db=UNIREF evalue=6.3e-08 bit_score=62.0 identity=66.7 coverage=71.21212121212122)
AMDSBAU_10_25
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15799..16911)
-----------------
DNA (1113bp)
protein (371aa)
transposase
transposase
Transposase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BE66_STRRD
Transposase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BE66_STRRD (db=UNIREF evalue=4.9e-118 bit_score=430.3 identity=61.4 coverage=94.87870619946092)
AMDSBAU_10_26
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17114..17515)
-----------------
DNA (402bp)
protein (134aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VVK6_9CYAN
coiled-coil (db=Coil db_id=coil from=14 to=35 evalue=NA)
coiled-coil (db=Coil db_id=coil from=91 to=119 evalue=NA)
AMDSBAU_10_27
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17502..17924)
-----------------
DNA (423bp)
protein (141aa)
integrase family protein
Integrase family protein n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VU14_9CYAN
coiled-coil (db=Coil db_id=coil from=114 to=138 evalue=NA)
AMDSBAU_10_28
unknown

Not on your lists

17956..18330
-----------------
DNA (375bp)
protein (125aa)
seg (db=Seg db_id=seg from=88 to=99)
AMDSBAU_10_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18296..19999)
-----------------
DNA (1704bp)
protein (568aa)
transposase (IS4 family protein) rbh
transposase (IS4 family protein) rbh
Transposase (IS4 family protein) n=2 Tax=Sulfobacillus acidophilus RepID=F8I4S2_SULAT
Transposase (IS4 family protein) n=2 Tax=Sulfobacillus acidophilus RepID=F8I4S2_SULAT (db=UNIREF evalue=2.1e-208 bit_score=731.1 identity=66.4 coverage=97.53521126760563)
AMDSBAU_10_30
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20048..21070)
-----------------
DNA (1023bp)
protein (341aa)
integrase family protein
Integrase family protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HWN7_CYAP4 (db=UNIREF evalue=5.5e-39 bit_score=167.5 identity=42.4 coverage=58.65102639296188)
(db=HMMPfam db_id=PF02899 from=195 to=255 evalue=0.00018 interpro_id=IPR004107 interpro_description=Integrase, SAM-like, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA integration (GO:0015074))
Displaying items 1-30 of 50 in total

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