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AMDSBAU_13

Alias: SULFO_OTHER_13

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBAU_13_1
unknown

Not on your lists

comp(79..318)
-----------------
DNA (240bp)
protein (80aa)
79..318 - ( gc_cont=0.550)
AMDSBAU_13_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

397..1146
-----------------
DNA (750bp)
protein (250aa)
3'-5' exonuclease
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I6B9_SULAT
(db=HMMPfam db_id=PF10108 from=44 to=242 evalue=1.2e-49 interpro_id=IPR019288 interpro_description=Predicted 3'-5' exonuclease, PolB-like)
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=72 to=209 evalue=1.4e-05)
AMDSBAU_13_3
unknown

Not on your lists

1200..1361
-----------------
DNA (162bp)
protein (54aa)
1200..1361 + ( gc_cont=0.549)
AMDSBAU_13_4
unknown

Not on your lists

1364..1570
-----------------
DNA (207bp)
protein (69aa)
seg (db=Seg db_id=seg from=30 to=39)
AMDSBAU_13_5
unknown

Not on your lists

1608..1859
-----------------
DNA (252bp)
protein (84aa)
1608..1859 + ( gc_cont=0.480)
AMDSBAU_13_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2075..2482
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I7M3_SULAT
AMDSBAU_13_7
unknown

Not on your lists

2503..3054
-----------------
DNA (552bp)
protein (184aa)
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=4 to=164 evalue=1.3e-18)
AMDSBAU_13_8
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3011..3457
-----------------
DNA (447bp)
protein (149aa)
StbA-family protein n=2 Tax=Sulfobacillus thermotolerans RepID=G5CJ03_9FIRM (db=UNIREF evalue=6.3e-16 bit_score=89.7 identity=34.0 coverage=96.64429530201343)
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=2 to=145 evalue=8.1e-12)
AMDSBAU_13_9
unknown

Not on your lists

3579..3887
-----------------
DNA (309bp)
protein (103aa)
3579..3887 + ( gc_cont=0.563)
AMDSBAU_13_10
unknown

Not on your lists

3884..4654
-----------------
DNA (771bp)
protein (257aa)
seg (db=Seg db_id=seg from=137 to=150)
AMDSBAU_13_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4673..6130
-----------------
DNA (1458bp)
protein (486aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I458_SULAT
seg (db=Seg db_id=seg from=309 to=320)
seg (db=Seg db_id=seg from=235 to=248)
AMDSBAU_13_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6171..7463
-----------------
DNA (1293bp)
protein (431aa)
type II secretion system protein E
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I457_SULAT
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=182 to=385 evalue=1.6e-33)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=90 to=383 evalue=2.6e-30)
AMDSBAU_13_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7463..8308
-----------------
DNA (846bp)
protein (282aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUN8_SULAD
transmembrane_regions (db=TMHMM db_id=tmhmm from=253 to=275)
transmembrane_regions (db=TMHMM db_id=tmhmm from=219 to=238)
AMDSBAU_13_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8328..9176
-----------------
DNA (849bp)
protein (283aa)
type II secretion system F domain-containing protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I454_SULAT
transmembrane_regions (db=TMHMM db_id=tmhmm from=95 to=114)
transmembrane_regions (db=TMHMM db_id=tmhmm from=68 to=90)
AMDSBAU_13_15
unknown

Not on your lists

9203..9364
-----------------
DNA (162bp)
protein (54aa)
seg (db=Seg db_id=seg from=19 to=30)
AMDSBAU_13_16
unknown

Not on your lists

comp(9424..9570)
-----------------
DNA (147bp)
protein (49aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=30)
AMDSBAU_13_17
unknown

Not on your lists

9698..9958
-----------------
DNA (261bp)
protein (87aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
AMDSBAU_13_18
Nodularia spumigena, Nodularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

10110..11240
-----------------
DNA (1131bp)
protein (377aa)
Putative uncharacterized protein n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZAT3_NODSP (db=UNIREF evalue=5.1e-70 bit_score=270.8 identity=40.5 coverage=97.87798408488064)
HNH endonuclease
no description (db=HMMSmart db_id=SM00507 from=274 to=338 evalue=0.0046 interpro_id=IPR003615 interpro_description=HNH nuclease)
(db=HMMPfam db_id=PF01844 from=288 to=341 evalue=3.6e-07 interpro_id=IPR002711 interpro_description=HNH endonuclease GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: endonuclease activity (GO:0004519))
AMDSBAU_13_19
Nodularia spumigena, Nodularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

11314..12447
-----------------
DNA (1134bp)
protein (378aa)
DNA-cytosine methyltransferase family protein n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZAT2_NODSP
DNA-cytosine methyltransferase family protein n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZAT2_NODSP (db=UNIREF evalue=5.7e-114 bit_score=416.8 identity=54.7 coverage=98.94179894179894)
DNA-cytosine methyltransferase
DNA-cytosine methyltransferase
AMDSBAU_13_20
unknown

Not on your lists

comp(13295..13744)
-----------------
DNA (450bp)
protein (150aa)
13295..13744 - ( gc_cont=0.527)
AMDSBAU_13_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13890..14519
-----------------
DNA (630bp)
protein (210aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I449_SULAT (db=UNIREF evalue=2.8e-25 bit_score=121.3 identity=40.6 coverage=78.57142857142857)
seg (db=Seg db_id=seg from=25 to=34)
seg (db=Seg db_id=seg from=142 to=160)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=39)
AMDSBAU_13_22
unknown

Not on your lists

14682..14912
-----------------
DNA (231bp)
protein (77aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=47 to=69)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=26 to=49)
AMDSBAU_13_23
unknown

Not on your lists

15025..15231
-----------------
DNA (207bp)
protein (69aa)
seg (db=Seg db_id=seg from=26 to=49)
transmembrane_regions (db=TMHMM db_id=tmhmm from=27 to=49)
AMDSBAU_13_24
unknown

Not on your lists

15345..15860
-----------------
DNA (516bp)
protein (172aa)
seg (db=Seg db_id=seg from=14 to=28)
AMDSBAU_13_25
unknown

Not on your lists

15857..16264
-----------------
DNA (408bp)
protein (136aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=6 to=28)
seg (db=Seg db_id=seg from=34 to=46)
AMDSBAU_13_26
unknown

Not on your lists

16295..16651
-----------------
DNA (357bp)
protein (119aa)
seg (db=Seg db_id=seg from=30 to=42)
seg (db=Seg db_id=seg from=76 to=99)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
AMDSBAU_13_27
unknown

Not on your lists

16669..16932
-----------------
DNA (264bp)
protein (88aa)
16669..16932 + ( gc_cont=0.598)
AMDSBAU_13_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16960..17316
-----------------
DNA (357bp)
protein (119aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=11 to=26)
AMDSBAU_13_29
unknown

Not on your lists

17304..17675
-----------------
DNA (372bp)
protein (124aa)
seg (db=Seg db_id=seg from=49 to=65)
seg (db=Seg db_id=seg from=85 to=123)
AMDSBAU_13_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17772..18161
-----------------
DNA (390bp)
protein (130aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I438_SULAT (db=UNIREF evalue=2.7e-07 bit_score=60.8 identity=28.2 coverage=86.92307692307692)
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=107)
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=48)
seg (db=Seg db_id=seg from=25 to=46)
Displaying items 1-30 of 54 in total

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