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AMDSBAU_27

Alias: SULFO_OTHER_27

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBAU_27_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..783
-----------------
DNA (783bp)
protein (261aa)
transposase IS4 family protein
Transposase IS4 family protein n=2 Tax=Sulfobacillus acidophilus RepID=F8IBH4_SULAT (db=UNIREF evalue=2.7e-78 bit_score=297.7 identity=58.4 coverage=89.65517241379311)
seg (db=Seg db_id=seg from=235 to=245)
(db=HMMPfam db_id=PF01609 from=78 to=151 evalue=3.3e-09 interpro_id=IPR002559 interpro_description=Transposase, IS4-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
AMDSBAU_27_2
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

780..950
-----------------
DNA (171bp)
protein (57aa)
transposase IS4 family protein
Transposase IS4 family protein n=11 Tax=Kyrpidia tusciae DSM 2912 RepID=D5WRJ4_BACT2 (db=UNIREF evalue=2.4e-16 bit_score=89.7 identity=76.8 coverage=96.49122807017544)
seg (db=Seg db_id=seg from=27 to=39)
AMDSBAU_27_3
unknown

Not on your lists

comp(947..1108)
-----------------
DNA (162bp)
protein (54aa)
947..1108 - ( gc_cont=0.568)
AMDSBAU_27_4
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1220..1897
-----------------
DNA (678bp)
protein (226aa)
cyclase family protein
Cyclase family protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3F991_CONWI (db=UNIREF evalue=4.1e-35 bit_score=154.1 identity=38.1 coverage=93.36283185840708)
seg (db=Seg db_id=seg from=175 to=188)
Putative cyclase (db=superfamily db_id=SSF102198 from=8 to=217 evalue=3.7e-56)
AMDSBAU_27_5
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

1894..2889
-----------------
DNA (996bp)
protein (332aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UT08_ROSS1 (db=UNIREF evalue=1.2e-59 bit_score=236.1 identity=39.6 coverage=97.59036144578313)
Galactose mutarotase-like (db=superfamily db_id=SSF74650 from=14 to=283 evalue=1.2e-07 interpro_id=IPR011013 interpro_description=Glycoside hydrolase-type carbohydrate-binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: carbohydrate binding (GO:0030246))
AMDSBAU_27_6
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

2846..3688
-----------------
DNA (843bp)
protein (281aa)
short-chain dehydrogenase protein
Short-chain dehydrogenase/reductase SDR n=1 Tax=Burkholderia sp. 383 RepID=Q39A64_BURS3 (db=UNIREF evalue=6.2e-57 bit_score=226.9 identity=48.3 coverage=90.39145907473309)
ADH_SHORT (db=PatternScan db_id=PS00061 from=168 to=196 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
seg (db=Seg db_id=seg from=19 to=30)
AMDSBAU_27_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4209..5117
-----------------
DNA (909bp)
protein (303aa)
faa; fumarylacetoacetase
Fumarylacetoacetase family protein n=2 Tax=Sorangium cellulosum RepID=A9FND2_SORC5 (db=UNIREF evalue=1.3e-60 bit_score=239.2 identity=47.2 coverage=93.72937293729373)
seg (db=Seg db_id=seg from=275 to=284)
no description (db=Gene3D db_id=G3DSA:3.90.850.10 from=63 to=291 evalue=5.1e-19 interpro_id=IPR011234 interpro_description=Fumarylacetoacetase, C-terminal-related GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
AMDSBAU_27_8
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

5288..7012
-----------------
DNA (1725bp)
protein (575aa)
UPI00029B1448 related cluster n=1 Tax=unknown RepID=UPI00029B1448
dihydroxy-acid dehydratase n=1 Tax=Schlesneria paludicola DSM 18645 RepID=UPI00029B1448 (db=UNIREF evalue=1.9e-177 bit_score=628.2 identity=55.3 coverage=99.1304347826087)
dihydroxy-acid dehydratase (EC:4.2.1.9)
dihydroxy-acid dehydratase (EC:4.2.1.9)
AMDSBAU_27_9
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7074..7865
-----------------
DNA (792bp)
protein (264aa)
IclR family transcriptional regulator n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SCF9_9BACT (db=UNIREF evalue=2.0e-41 bit_score=175.3 identity=37.8 coverage=93.56060606060606)
hypothetical protein
seg (db=Seg db_id=seg from=55 to=68)
(db=HMMPfam db_id=PF01614 from=125 to=245 evalue=2.3e-31 interpro_id=IPR014757 interpro_description=Transcription regulator IclR, C-terminal)
AMDSBAU_27_10
unknown

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comp(8310..8621)
-----------------
DNA (312bp)
protein (104aa)
8310..8621 - ( gc_cont=0.529)
AMDSBAU_27_11
unknown

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8808..9212
-----------------
DNA (405bp)
protein (135aa)
8808..9212 + ( gc_cont=0.568)
AMDSBAU_27_12
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9871..10722)
-----------------
DNA (852bp)
protein (284aa)
IclR family transcriptional regulator n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SCF9_9BACT (db=UNIREF evalue=1.9e-45 bit_score=188.7 identity=37.8 coverage=88.02816901408451)
hypothetical protein
seg (db=Seg db_id=seg from=64 to=81)
(db=HMMPfam db_id=PF09339 from=8 to=58 evalue=1.2e-11 interpro_id=IPR005471 interpro_description=Transcription regulator IclR, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBAU_27_13
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11046..12185
-----------------
DNA (1140bp)
protein (380aa)
radical SAM domain-containing protein n=1 Tax=Paenibacillus peoriae KCTC 3763 RepID=UPI00026C6698 (db=UNIREF evalue=2.7e-111 bit_score=407.9 identity=51.8 coverage=95.26315789473684)
radical SAM domain protein
seg (db=Seg db_id=seg from=197 to=208)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=8 to=328 evalue=1.2e-45)
AMDSBAU_27_14
unknown

Not on your lists

comp(12726..12992)
-----------------
DNA (267bp)
protein (89aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=28)
AMDSBAU_27_15
unknown

Not on your lists

13138..13329
-----------------
DNA (192bp)
protein (64aa)
seg (db=Seg db_id=seg from=33 to=49)
AMDSBAU_27_16
unknown

Not on your lists

comp(13514..13693)
-----------------
DNA (180bp)
protein (60aa)
13514..13693 - ( gc_cont=0.617)
AMDSBAU_27_17
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

13808..14251
-----------------
DNA (444bp)
protein (148aa)
seg (db=Seg db_id=seg from=105 to=122)
AMDSBAU_27_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14220..14759
-----------------
DNA (540bp)
protein (180aa)
transposase, IS605 OrfB family
Transposase, IS605 OrfB family n=1 Tax=Sulfobacillus acidophilus DSM 10332 RepID=G8TYY6_SULAD (db=UNIREF evalue=2.1e-42 bit_score=177.9 identity=54.7 coverage=91.11111111111111)
seg (db=Seg db_id=seg from=22 to=36)
(db=HMMPfam db_id=PF07282 from=76 to=143 evalue=4.2e-16 interpro_id=IPR010095 interpro_description=Transposase IS605, OrfB, C-terminal)
AMDSBAU_27_19
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(14920..15774)
-----------------
DNA (855bp)
protein (285aa)
binding-protein-dependent transport system inner membrane protein
Carbohydrate ABC transporter membrane protein 2, CUT1 family n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LS00_ACIC1 (db=UNIREF evalue=2.9e-78 bit_score=297.7 identity=52.7 coverage=96.49122807017544)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=249 to=266)
AMDSBAU_27_20
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(15778..16659)
-----------------
DNA (882bp)
protein (294aa)
binding-protein-dependent transport system inner membrane protein
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LRZ9_ACIC1 (db=UNIREF evalue=1.4e-78 bit_score=298.9 identity=49.8 coverage=98.63945578231292)
transmembrane_regions (db=TMHMM db_id=tmhmm from=217 to=239)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
AMDSBAU_27_21
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(16794..18086)
-----------------
DNA (1293bp)
protein (431aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LRZ8_ACIC1 (db=UNIREF evalue=1.2e-88 bit_score=332.8 identity=40.2 coverage=93.03944315545245)
extracellular solute-binding protein
extracellular solute-binding protein
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRZ8_ACIC1
AMDSBAU_27_22
Paenibacillus sp. IHB B 3415, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18163..18828)
-----------------
DNA (666bp)
protein (222aa)
hypothetical protein
Dimethylmenaquinone methyltransferase n=1 Tax=Advenella kashmirensis WT001 RepID=I3UC27_9BURK (db=UNIREF evalue=2.1e-47 bit_score=194.9 identity=47.2 coverage=94.5945945945946)
(db=HMMPfam db_id=PF03737 from=21 to=177 evalue=3.4e-27 interpro_id=IPR005493 interpro_description=Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase)
no description (db=Gene3D db_id=G3DSA:3.50.30.40 from=15 to=196 evalue=3.0e-33 interpro_id=IPR005493 interpro_description=Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase)
AMDSBAU_27_23
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

19129..20682
-----------------
DNA (1554bp)
protein (518aa)
glycoside hydrolase family protein
glycoside hydrolase family protein
Glycoside hydrolase family 4 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGJ4_THET1
Glycoside hydrolase family 4 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CGJ4_THET1 (db=UNIREF evalue=6.3e-156 bit_score=556.6 identity=55.8 coverage=86.10038610038609)
AMDSBAU_27_24
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20739..22202
-----------------
DNA (1464bp)
protein (488aa)
sulfatase n=1 Tax=Paenibacillus peoriae KCTC 3763 RepID=UPI00026C615A
sulfatase n=1 Tax=Paenibacillus peoriae KCTC 3763 RepID=UPI00026C615A (db=UNIREF evalue=1.8e-173 bit_score=614.8 identity=59.2 coverage=98.5655737704918)
sulfatase
sulfatase
AMDSBAU_27_25
unknown

Not on your lists

22237..22479
-----------------
DNA (243bp)
protein (81aa)
22237..22479 + ( gc_cont=0.593)
AMDSBAU_27_26
unknown

Not on your lists

22449..22715
-----------------
DNA (267bp)
protein (89aa)
22449..22715 + ( gc_cont=0.588)
AMDSBAU_27_27
unknown

Not on your lists

comp(22981..23151)
-----------------
DNA (171bp)
protein (57aa)
22981..23151 - ( gc_cont=0.538)
AMDSBAU_27_28
unknown

Not on your lists

23424..24113
-----------------
DNA (690bp)
protein (230aa)
seg (db=Seg db_id=seg from=16 to=25)
seg (db=Seg db_id=seg from=83 to=98)
seg (db=Seg db_id=seg from=111 to=124)
AMDSBAU_27_29
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24100..24195
-----------------
DNA (96bp)
protein (32aa)
DNA polymerase
24100..24195 + ( gc_cont=0.542)
Displaying 29 items

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