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AMDSBAU_30

Alias: SULFO_OTHER_30

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBAU_30_1
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2..328
-----------------
DNA (327bp)
protein (109aa)
5-carboxymethyl-2-hydroxymuconate isomerase
5-carboxymethyl-2-hydroxymuconateDelta-isomerase n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9HDG6_9BACL (db=UNIREF evalue=7.6e-27 bit_score=125.6 identity=59.3 coverage=96.3302752293578)
(db=HMMPfam db_id=PF01557 from=3 to=106 evalue=3.0e-30 interpro_id=IPR002529 interpro_description=Fumarylacetoacetase, C-terminal GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
FUMARYLACETOACETATE HYDROLASE (db=HMMPanther db_id=PTHR11820 from=5 to=107 evalue=3.3e-34)
AMDSBAU_30_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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997..2598
-----------------
DNA (1602bp)
protein (534aa)
amino acid/polyamine/organocation transporter
amino acid/polyamine/organocation transporter
Amino acid permease-associated region n=2 Tax=Sulfobacillus acidophilus RepID=F8I656_SULAT
Amino acid permease-associated region n=2 Tax=Sulfobacillus acidophilus RepID=F8I656_SULAT (db=UNIREF evalue=1.4e-198 bit_score=698.4 identity=65.6 coverage=93.82022471910112)
AMDSBAU_30_3
unknown

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2623..2730
-----------------
DNA (108bp)
protein (36aa)
2623..2730 + ( gc_cont=0.546)
AMDSBAU_30_4
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(2721..3437)
-----------------
DNA (717bp)
protein (239aa)
hypothetical protein
Uncharacterized protein n=3 Tax=Rhizobium/Agrobacterium group RepID=B9JLE6_AGRRK
(db=HMMPfam db_id=PF01177 from=59 to=220 evalue=3.3e-07 interpro_id=IPR015942 interpro_description=Asp/Glu/hydantoin racemase)
AMDSBAU_30_5
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3520..5226)
-----------------
DNA (1707bp)
protein (569aa)
thiamine pyrophosphate TPP-binding domain-containing protein
thiamine pyrophosphate TPP-binding domain-containing protein
Thiamine pyrophosphate protein TPP binding domain protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WQC1_ACTMD
Thiamine pyrophosphate protein TPP binding domain protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WQC1_ACTMD (db=UNIREF evalue=1.5e-145 bit_score=522.3 identity=50.1 coverage=98.59402460456941)
AMDSBAU_30_6
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(5216..6358)
-----------------
DNA (1143bp)
protein (381aa)
Glycine oxidase
Glycine oxidase n=1 Tax=Saccharothrix espanaensis DSM 44229 RepID=K0JTF2_SACES (db=UNIREF evalue=1.9e-64 bit_score=252.3 identity=36.6 coverage=98.9501312335958)
seg (db=Seg db_id=seg from=6 to=15)
FAD-linked reductases, C-terminal domain (db=superfamily db_id=SSF54373 from=220 to=312 evalue=1.4e-08)
AMDSBAU_30_7
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(6375..7139)
-----------------
DNA (765bp)
protein (255aa)
MerR family transcriptional regulator
Transcriptional regulator, MerR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEA2_CARHZ (db=UNIREF evalue=2.8e-32 bit_score=144.8 identity=37.4 coverage=96.86274509803921)
HTH_MERR_1 (db=PatternScan db_id=PS00552 from=6 to=28 evalue=0.0 interpro_id=IPR000551 interpro_description=Transcription regulator HTH, MerR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
(db=HMMPfam db_id=PF00376 from=4 to=40 evalue=1.2e-11 interpro_id=IPR000551 interpro_description=Transcription regulator HTH, MerR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBAU_30_8
unknown

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comp(7260..7394)
-----------------
DNA (135bp)
protein (45aa)
7260..7394 - ( gc_cont=0.548)
AMDSBAU_30_9
Bacillus sp. X1(2014), Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7700..8443
-----------------
DNA (744bp)
protein (248aa)
GntR family transcriptional regulator
Transcriptional regulator n=2 Tax=Bacillales RepID=F2F8H7_SOLSS
coiled-coil (db=Coil db_id=coil from=106 to=127 evalue=NA)
seg (db=Seg db_id=seg from=53 to=60)
AMDSBAU_30_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8661..9698
-----------------
DNA (1038bp)
protein (346aa)
3-methyl-2-oxobutanoate dehydrogenase (EC:1.2.4.4)
Branched-chain alpha-keto acid dehydrogenase E1 alpha chain n=2 Tax=Sulfobacillus acidophilus RepID=F8I2W4_SULAT (db=UNIREF evalue=1.3e-99 bit_score=369.0 identity=57.9 coverage=91.04046242774567)
seg (db=Seg db_id=seg from=235 to=245)
PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT (BACTERIAL AND ORGANELLAR) (db=HMMPanther db_id=PTHR11516 from=1 to=344 evalue=3.2e-106)
AMDSBAU_30_11
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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9720..11822
-----------------
DNA (2103bp)
protein (701aa)
UPI0002627D76 related cluster n=1 Tax=unknown RepID=UPI0002627D76
5-oxoprolinase (EC:3.5.2.9)
coiled-coil (db=Coil db_id=coil from=43 to=64 evalue=NA)
(db=HMMPfam db_id=PF05378 from=9 to=193 evalue=2.6e-41 interpro_id=IPR008040 interpro_description=Hydantoinaseoxoprolinase, N-terminal)
AMDSBAU_30_12
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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11892..14084
-----------------
DNA (2193bp)
protein (731aa)
N-methylhydantoinase B n=1 Tax=Patulibacter sp. I11 RepID=H0E718_9ACTN
N-methylhydantoinase B n=1 Tax=Patulibacter sp. I11 RepID=H0E718_9ACTN (db=UNIREF evalue=1.3e-268 bit_score=931.4 identity=63.3 coverage=98.49521203830369)
N-methylhydantoinase B
seg (db=Seg db_id=seg from=284 to=295)
AMDSBAU_30_13
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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14123..15190
-----------------
DNA (1068bp)
protein (356aa)
Ribose ABC transporter substrate-binding protein n=1 Tax=Patulibacter sp. I11 RepID=H0E719_9ACTN (db=UNIREF evalue=9.3e-74 bit_score=283.1 identity=47.0 coverage=85.67415730337079)
sugar ABC transporter substrate-binding protein
seg (db=Seg db_id=seg from=76 to=93)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=23 evalue=6.0)
AMDSBAU_30_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15195..16718
-----------------
DNA (1524bp)
protein (508aa)
Ribose ABC transport system ATP-binding protein RbsA (TC 3.A.1.2.1) n=1 Tax=Patulibacter sp. I11 RepID=H0E720_9ACTN (db=UNIREF evalue=1.1e-115 bit_score=422.9 identity=46.6 coverage=98.4251968503937)
ABC transporter
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=396 to=410 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
seg (db=Seg db_id=seg from=125 to=138)
AMDSBAU_30_15
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16720..17700
-----------------
DNA (981bp)
protein (327aa)
Ribose ABC transport system permease protein RbsC (TC 3.A.1.2.1) n=1 Tax=Patulibacter sp. I11 RepID=H0E721_9ACTN (db=UNIREF evalue=5.0e-66 bit_score=257.3 identity=47.9 coverage=87.1559633027523)
inner-membrane translocator
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=299 to=314)
AMDSBAU_30_16
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17697..18683
-----------------
DNA (987bp)
protein (329aa)
Ribose ABC transport system permease protein RbsC (TC 3.A.1.2.1) n=1 Tax=Patulibacter sp. I11 RepID=H0E722_9ACTN (db=UNIREF evalue=9.2e-76 bit_score=289.7 identity=50.8 coverage=88.14589665653494)
inner-membrane translocator
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
seg (db=Seg db_id=seg from=257 to=272)
AMDSBAU_30_17
Geobacillus thermodenitrificans, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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18737..20179
-----------------
DNA (1443bp)
protein (481aa)
Aldehyde dehydrogenase n=2 Tax=Geobacillus RepID=A4IK23_GEOTN (db=UNIREF evalue=3.5e-148 bit_score=530.8 identity=55.8 coverage=98.75259875259876)
aldehyde dehydrogenase
aldehyde dehydrogenase
Aldehyde dehydrogenase n=2 Tax=Geobacillus RepID=A4IK23_GEOTN
AMDSBAU_30_18
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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20210..20977
-----------------
DNA (768bp)
protein (256aa)
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR n=1 Tax=Kyrpidia tusciae DSM 2912 RepID=D5WWB1_BACT2 (db=UNIREF evalue=1.0e-77 bit_score=295.8 identity=60.4 coverage=98.046875)
ADH_SHORT (db=PatternScan db_id=PS00061 from=142 to=170 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
seg (db=Seg db_id=seg from=228 to=241)
AMDSBAU_30_19
Selenomonas sp. oral taxon 149, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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20977..22128
-----------------
DNA (1152bp)
protein (384aa)
tartrate dehydrogenase n=1 Tax=Paenibacillus elgii B69 RepID=UPI000248D12D
tartrate dehydrogenase n=1 Tax=Paenibacillus elgii B69 RepID=UPI000248D12D (db=UNIREF evalue=1.6e-116 bit_score=425.2 identity=58.2 coverage=91.92708333333334)
tartrate dehydrogenase
tartrate dehydrogenase
AMDSBAU_30_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22162..23484
-----------------
DNA (1323bp)
protein (441aa)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8IBW4_SULAT
Methylmalonyl-CoA mutase n=2 Tax=Sulfobacillus acidophilus RepID=G8TWP7_SULAD (db=UNIREF evalue=4.8e-205 bit_score=719.5 identity=80.4 coverage=99.77324263038548)
hypothetical protein
hypothetical protein
Displaying 20 items

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