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AMDSBAU_37

Alias: SULFO_OTHER_37

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBAU_37_1
unknown

Not on your lists

comp(422..778)
-----------------
DNA (357bp)
protein (119aa)
422..778 - ( gc_cont=0.378)
AMDSBAU_37_2
unknown

Not on your lists

comp(918..1298)
-----------------
DNA (381bp)
protein (127aa)
918..1298 - ( gc_cont=0.449)
AMDSBAU_37_3
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1313..2143)
-----------------
DNA (831bp)
protein (277aa)
DNA methylase N-4/N-6 domain-containing protein
DNA methylase N-4/N-6 domain protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J493_DESDA (db=UNIREF evalue=7.2e-74 bit_score=283.1 identity=51.4 coverage=90.97472924187726)
N6_MTASE (db=PatternScan db_id=PS00092 from=33 to=39 evalue=0.0 interpro_id=IPR002052 interpro_description=DNA methylase, N-6 adenine-specific, conserved site GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: methyltransferase activity (GO:0008168), Biological Process: methylation (GO:0032259))
S21N4MTFRASE (db=FPrintScan db_id=PR00508 from=29 to=43 evalue=1.1e-17 interpro_id=IPR001091 interpro_description=Restriction/modification DNA-methylase GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA methylation (GO:0006306), Molecular Function: N-methyltransferase activity (GO:0008170))
AMDSBAU_37_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2352..3464)
-----------------
DNA (1113bp)
protein (371aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=2 Tax=Sulfobacillus acidophilus RepID=F8I307_SULAT (db=UNIREF evalue=3.5e-47 bit_score=194.9 identity=34.0 coverage=99.19137466307278)
DNA clamp (db=superfamily db_id=SSF55979 from=1 to=119 evalue=1.6e-12)
(db=HMMPfam db_id=PF00712 from=1 to=120 evalue=1.2e-14 interpro_id=IPR022634 interpro_description=DNA polymerase III, beta chain, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
AMDSBAU_37_5
unknown

Not on your lists

comp(3439..3903)
-----------------
DNA (465bp)
protein (155aa)
seg (db=Seg db_id=seg from=55 to=63)
AMDSBAU_37_6
unknown

Not on your lists

comp(3906..4154)
-----------------
DNA (249bp)
protein (83aa)
3906..4154 - ( gc_cont=0.574)
AMDSBAU_37_7
unknown

Not on your lists

comp(4141..4611)
-----------------
DNA (471bp)
protein (157aa)
4141..4611 - ( gc_cont=0.490)
AMDSBAU_37_8
unknown

Not on your lists

5056..5742
-----------------
DNA (687bp)
protein (229aa)
seg (db=Seg db_id=seg from=11 to=35)
seg (db=Seg db_id=seg from=98 to=117)
AMDSBAU_37_9
unknown

Not on your lists

5902..6594
-----------------
DNA (693bp)
protein (231aa)
seg (db=Seg db_id=seg from=159 to=172)
AMDSBAU_37_10

Not on your lists

6584..8788
-----------------
DNA (2205bp)
protein (735aa)
DNA methylase n=1 Tax=Synechococcus phage S-CBS3 RepID=F4YCV3_9CAUD
DNA methylase n=1 Tax=Synechococcus phage S-CBS3 RepID=F4YCV3_9CAUD (db=UNIREF evalue=2.6e-187 bit_score=661.4 identity=45.3 coverage=99.04761904761905)
DNA methylase N-4/N-6 domain-containing protein
DNA methylase N-4/N-6 domain-containing protein
AMDSBAU_37_11
unknown

Not on your lists

8802..9026
-----------------
DNA (225bp)
protein (75aa)
8802..9026 + ( gc_cont=0.533)
AMDSBAU_37_12
unknown

Not on your lists

9072..10301
-----------------
DNA (1230bp)
protein (410aa)
seg (db=Seg db_id=seg from=117 to=126)
seg (db=Seg db_id=seg from=2 to=13)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=148 to=402 evalue=2.9e-17)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=136 to=396 evalue=3.0e-17)
AMDSBAU_37_13
unknown

Not on your lists

10306..11187
-----------------
DNA (882bp)
protein (294aa)
seg (db=Seg db_id=seg from=215 to=226)
seg (db=Seg db_id=seg from=195 to=209)
no description (db=HMMSmart db_id=SM00493 from=194 to=264 evalue=0.003 interpro_id=IPR006171 interpro_description=Toprim domain)
no description (db=Gene3D db_id=G3DSA:3.40.1360.10 from=179 to=292 evalue=1.0e-08)
AMDSBAU_37_14
unknown

Not on your lists

11268..11543
-----------------
DNA (276bp)
protein (92aa)
11268..11543 + ( gc_cont=0.529)
AMDSBAU_37_15
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11531..12241
-----------------
DNA (711bp)
protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZFA6_9CLOT
Thymidylate synthase-complementing protein Thy1 (db=superfamily db_id=SSF69796 from=1 to=198 evalue=1.6e-12 interpro_id=IPR003669 interpro_description=Thymidylate synthase ThyX GO=Biological Process: dTMP biosynthetic process (GO:0006231), Molecular Function: flavin adenine dinucleotide binding (GO:0050660), Molecular Function: thymidylate synthase (FAD) activity (GO:0050797))
(db=HMMPfam db_id=PF02511 from=2 to=179 evalue=4.0e-21 interpro_id=IPR003669 interpro_description=Thymidylate synthase ThyX GO=Biological Process: dTMP biosynthetic process (GO:0006231), Molecular Function: flavin adenine dinucleotide binding (GO:0050660), Molecular Function: thymidylate synthase (FAD) activity (GO:0050797))
THYX (db=ProfileScan db_id=PS51331 from=1 to=191 evalue=12.124 interpro_id=IPR003669 interpro_description=Thymidylate synthase ThyX GO=Biological Process: dTMP biosynthetic process (GO:0006231), Molecular Function: flavin adenine dinucleotide binding (GO:0050660), Molecular Function: thymidylate synthase (FAD) activity (GO:0050797))
AMDSBAU_37_16
unknown

Not on your lists

12339..12965
-----------------
DNA (627bp)
protein (209aa)
12339..12965 + ( gc_cont=0.510)
AMDSBAU_37_17
unknown

Not on your lists

13019..13813
-----------------
DNA (795bp)
protein (265aa)
13019..13813 + ( gc_cont=0.499)
AMDSBAU_37_18
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


13810..14817
-----------------
DNA (1008bp)
protein (336aa)
BSCG--recA
Protein RecA n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WG20_9ACTN (db=UNIREF evalue=1.0e-42 bit_score=179.9 identity=37.1 coverage=88.69047619047619)
protein RecA
no description (db=HMMSmart db_id=SM00382 from=48 to=229 evalue=0.007 interpro_id=IPR003593 interpro_description=ATPase, AAA+ type, core GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: nucleoside-triphosphatase activity (GO:0017111))
AMDSBAU_37_19
unknown

Not on your lists

14811..15287
-----------------
DNA (477bp)
protein (159aa)
14811..15287 + ( gc_cont=0.518)
AMDSBAU_37_20
unknown

Not on your lists

15268..16656
-----------------
DNA (1389bp)
protein (463aa)
seg (db=Seg db_id=seg from=194 to=211)
seg (db=Seg db_id=seg from=3 to=13)
seg (db=Seg db_id=seg from=447 to=461)
(db=HMMPfam db_id=PF06048 from=64 to=293 evalue=3.3e-17 interpro_id=IPR009270 interpro_description=Bacteriophage PT1028, Orf1)
AMDSBAU_37_21
unknown

Not on your lists

16685..17053
-----------------
DNA (369bp)
protein (123aa)
16685..17053 + ( gc_cont=0.564)
AMDSBAU_37_22
unknown

Not on your lists

17040..17402
-----------------
DNA (363bp)
protein (121aa)
seg (db=Seg db_id=seg from=8 to=25)
AMDSBAU_37_23
unknown

Not on your lists

17468..17827
-----------------
DNA (360bp)
protein (120aa)
Holliday junction resolvase RusA (db=superfamily db_id=SSF103084 from=27 to=93 evalue=1.5e-08 interpro_id=IPR008822 interpro_description=Endodeoxyribonuclease, RusA-like GO=Molecular Function: magnesium ion binding (GO:0000287), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
AMDSBAU_37_24
unknown

Not on your lists

18054..18428
-----------------
DNA (375bp)
protein (125aa)
coiled-coil (db=Coil db_id=coil from=7 to=35 evalue=NA)
AMDSBAU_37_25
unknown

Not on your lists

comp(19049..19507)
-----------------
DNA (459bp)
protein (153aa)
19049..19507 - ( gc_cont=0.495)
AMDSBAU_37_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19594..21153)
-----------------
DNA (1560bp)
protein (520aa)
SNF2-related protein
SNF2-related protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUW1_SULAD
seg (db=Seg db_id=seg from=165 to=174)
ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED (db=HMMPanther db_id=PTHR10799 from=87 to=496 evalue=3.3e-69)
AMDSBAU_37_27
unknown

Not on your lists

comp(21150..21392)
-----------------
DNA (243bp)
protein (81aa)
21150..21392 - ( gc_cont=0.506)
Displaying 27 items

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