ggKbase home page

AMDSBAU_47

Alias: SULFO_OTHER_47

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBAU_47_1
unknown

Not on your lists

299..730
-----------------
DNA (432bp)
protein (144aa)
seg (db=Seg db_id=seg from=97 to=106)
seg (db=Seg db_id=seg from=132 to=140)
AMDSBAU_47_2
unknown

Not on your lists

771..953
-----------------
DNA (183bp)
protein (61aa)
seg (db=Seg db_id=seg from=34 to=48)
AMDSBAU_47_3
unknown

Not on your lists

991..1602
-----------------
DNA (612bp)
protein (204aa)
seg (db=Seg db_id=seg from=34 to=47)
AMDSBAU_47_4
unknown

Not on your lists

1640..2077
-----------------
DNA (438bp)
protein (146aa)
1640..2077 + ( gc_cont=0.660)
AMDSBAU_47_5
unknown

Not on your lists

2121..2507
-----------------
DNA (387bp)
protein (129aa)
seg (db=Seg db_id=seg from=5 to=13)
seg (db=Seg db_id=seg from=111 to=127)
AMDSBAU_47_6
unknown

Not on your lists

2552..3088
-----------------
DNA (537bp)
protein (179aa)
seg (db=Seg db_id=seg from=24 to=39)
AMDSBAU_47_7
Bacillus phage Grass, Caudovirales, Viruses

Not on your lists

3351..4214
-----------------
DNA (864bp)
protein (288aa)
seg (db=Seg db_id=seg from=144 to=156)
AMDSBAU_47_8
unknown

Not on your lists

4436..4723
-----------------
DNA (288bp)
protein (96aa)
4436..4723 + ( gc_cont=0.611)
AMDSBAU_47_9
unknown

Not on your lists

5071..5319
-----------------
DNA (249bp)
protein (83aa)
seg (db=Seg db_id=seg from=62 to=68)
AMDSBAU_47_10
unknown

Not on your lists

5316..5630
-----------------
DNA (315bp)
protein (105aa)
seg (db=Seg db_id=seg from=54 to=71)
AMDSBAU_47_11
unknown

Not on your lists

5648..6187
-----------------
DNA (540bp)
protein (180aa)
5648..6187 + ( gc_cont=0.648)
AMDSBAU_47_12
unknown

Not on your lists

6184..6885
-----------------
DNA (702bp)
protein (234aa)
seg (db=Seg db_id=seg from=95 to=109)
seg (db=Seg db_id=seg from=113 to=138)
seg (db=Seg db_id=seg from=222 to=233)
AMDSBAU_47_13
Virgibacillus sp. Vm-5, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6910..7212
-----------------
DNA (303bp)
protein (101aa)
hypothetical protein
Uncharacterized protein n=3 Tax=Bacillus thuringiensis RepID=C3IV17_BACTU (db=UNIREF evalue=2.3e-09 bit_score=67.4 identity=41.7 coverage=78.21782178217822)
AMDSBAU_47_14
RIFOXYC2_FULL_RIF01_39_67_curated, RIF1, Bacteria

Not on your lists

7209..7784
-----------------
DNA (576bp)
protein (192aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47D11_DECAR (db=UNIREF evalue=1.1e-07 bit_score=62.8 identity=32.4 coverage=67.70833333333334)
seg (db=Seg db_id=seg from=137 to=149)
AMDSBAU_47_15
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7798..8184
-----------------
DNA (387bp)
protein (129aa)
7798..8184 + ( gc_cont=0.630)
AMDSBAU_47_16
Virgibacillus sp. Vm-5, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8171..9055
-----------------
DNA (885bp)
protein (295aa)
ThiF family protein
Uncharacterized protein n=3 Tax=Bacillus thuringiensis RepID=C3IV18_BACTU (db=UNIREF evalue=1.5e-45 bit_score=189.1 identity=43.3 coverage=84.40677966101696)
seg (db=Seg db_id=seg from=190 to=199)
seg (db=Seg db_id=seg from=24 to=36)
AMDSBAU_47_17
unknown

Not on your lists

9078..9338
-----------------
DNA (261bp)
protein (87aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
AMDSBAU_47_18
unknown

Not on your lists

9468..9662
-----------------
DNA (195bp)
protein (65aa)
9468..9662 + ( gc_cont=0.621)
AMDSBAU_47_19
unknown

Not on your lists

10008..10385
-----------------
DNA (378bp)
protein (126aa)
seg (db=Seg db_id=seg from=5 to=25)
seg (db=Seg db_id=seg from=61 to=87)
AMDSBAU_47_20
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10378..11256
-----------------
DNA (879bp)
protein (293aa)
hypothetical protein
Phage Gp37Gp68 n=4 Tax=Mycobacterium massiliense RepID=I8G5E8_9MYCO (db=UNIREF evalue=1.1e-64 bit_score=252.7 identity=50.0 coverage=85.6655290102389)
seg (db=Seg db_id=seg from=177 to=191)
(db=HMMPfam db_id=PF07505 from=4 to=276 evalue=4.5e-85 interpro_id=IPR011101 interpro_description=Burkholderia phage phiE125, Gp37)
AMDSBAU_47_21
unknown

Not on your lists

11260..11358
-----------------
DNA (99bp)
protein (33aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
AMDSBAU_47_22
unknown

Not on your lists

11377..11883
-----------------
DNA (507bp)
protein (169aa)
11377..11883 + ( gc_cont=0.651)
AMDSBAU_47_23
unknown

Not on your lists

12433..12633
-----------------
DNA (201bp)
protein (67aa)
12433..12633 + ( gc_cont=0.468)
AMDSBAU_47_24
unknown

Not on your lists

comp(12630..12734)
-----------------
DNA (105bp)
protein (35aa)
12630..12734 - ( gc_cont=0.695)
AMDSBAU_47_25
unknown

Not on your lists

12997..13653
-----------------
DNA (657bp)
protein (219aa)
seg (db=Seg db_id=seg from=43 to=55)
seg (db=Seg db_id=seg from=189 to=204)
(db=HMMPfam db_id=PF10040 from=105 to=213 evalue=8.1e-13 interpro_id=IPR019267 interpro_description=CRISPR-associated protein Cas6 domain)
AMDSBAU_47_26
unknown

Not on your lists

13684..14592
-----------------
DNA (909bp)
protein (303aa)
13684..14592 + ( gc_cont=0.636)
AMDSBAU_47_27
unknown

Not on your lists

14594..15655
-----------------
DNA (1062bp)
protein (354aa)
seg (db=Seg db_id=seg from=311 to=322)
AMDSBAU_47_28
unknown

Not on your lists

15663..16412
-----------------
DNA (750bp)
protein (250aa)
seg (db=Seg db_id=seg from=30 to=43)
AMDSBAU_47_29
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

16425..18635
-----------------
DNA (2211bp)
protein (737aa)
helicase, RecD/TraA family
Helicase, RecD/TraA family n=2 Tax=Chloroflexus RepID=A9WGW5_CHLAA (db=UNIREF evalue=6.3e-24 bit_score=118.6 identity=28.8 coverage=62.41519674355496)
seg (db=Seg db_id=seg from=180 to=200)
seg (db=Seg db_id=seg from=701 to=729)
Displaying 29 items

View Taxonomy