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AMDSBAU_54

Alias: SULFO_OTHER_54

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBAU_54_1
unknown

Not on your lists

comp(33..278)
DNA (246bp) protein (82aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
AMDSBAU_54_2
unknown

Not on your lists

comp(381..698)
DNA (318bp) protein (106aa)
seg (db=Seg db_id=seg from=4 to=14)
transmembrane_regions (db=TMHMM db_id=tmhmm from=23 to=45)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
AMDSBAU_54_3
unknown

Not on your lists

comp(802..1608)
DNA (807bp) protein (269aa)
coiled-coil (db=Coil db_id=coil from=120 to=141 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=145 to=167)
transmembrane_regions (db=TMHMM db_id=tmhmm from=171 to=190)
seg (db=Seg db_id=seg from=68 to=73)
AMDSBAU_54_4
unknown

Not on your lists

comp(1752..1922)
DNA (171bp) protein (57aa)
1752..1922 - ( gc_cont=0.439)
AMDSBAU_54_5
unknown

Not on your lists

comp(1974..2342)
DNA (369bp) protein (123aa)
1974..2342 - ( gc_cont=0.469)
AMDSBAU_54_6
unknown

Not on your lists

comp(2512..2730)
DNA (219bp) protein (73aa)
2512..2730 - ( gc_cont=0.511)
AMDSBAU_54_7
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

comp(2949..3473)
DNA (525bp) protein (175aa)
hypothetical protein
hypothetical protein Tax=GWC2_Clostridiales_40_7_curated
Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1H9_ACIFD (db=UNIREF evalue=4.6e-18 bit_score=97.1 identity=34.8 coverage=92.0)
AMDSBAU_54_8
unknown

Not on your lists

comp(3521..4660)
DNA (1140bp) protein (380aa)
3521..4660 - ( gc_cont=0.448)
AMDSBAU_54_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4989..5219)
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:AEJ40911.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=38 evalue=4.0e-06)
AMDSBAU_54_10
unknown

Not on your lists

comp(5239..5610)
DNA (372bp) protein (124aa)
(db=HMMPfam db_id=PF03118 from=64 to=115 evalue=1.4e-05 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351))
AMDSBAU_54_11
unknown

Not on your lists

comp(5603..5809)
DNA (207bp) protein (69aa)
5603..5809 - ( gc_cont=0.556)
AMDSBAU_54_12
unknown

Not on your lists

comp(5870..6265)
DNA (396bp) protein (132aa)
5870..6265 - ( gc_cont=0.551)
AMDSBAU_54_13
unknown

Not on your lists

comp(6718..6909)
DNA (192bp) protein (64aa)
6718..6909 - ( gc_cont=0.578)
AMDSBAU_54_14
Centipeda periodontii, Centipeda, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6990..7601)
DNA (612bp) protein (204aa)
DNA-directed RNA polymerase sigma subunit SigH {ECO:0000313|EMBL:EGK60700.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EGK60700.1};; TaxID=888060 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Vei
DNA-directed RNA polymerase sigma subunit SigH n=3 Tax=Veillonellaceae RepID=F5RLE5_9FIRM (db=UNIREF evalue=2.2e-19 bit_score=101.7 identity=31.7 coverage=95.58823529411765)
spo0H; RNA polymerase factor sigma-70 (EC:2.7.7.6)
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=22 to=200 evalue=1.6e-12 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169
AMDSBAU_54_15
unknown

Not on your lists

comp(7611..7700)
DNA (90bp) protein (30aa)
7611..7700 - ( gc_cont=0.522)
AMDSBAU_54_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7915..8136)
DNA (222bp) protein (74aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ40883.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I485_SULAT
AMDSBAU_54_17
unknown

Not on your lists

comp(8173..8466)
DNA (294bp) protein (98aa)
8173..8466 - ( gc_cont=0.520)
AMDSBAU_54_18
unknown

Not on your lists

comp(8481..8732)
DNA (252bp) protein (84aa)
8481..8732 - ( gc_cont=0.520)
AMDSBAU_54_19
unknown

Not on your lists

comp(8807..9016)
DNA (210bp) protein (70aa)
8807..9016 - ( gc_cont=0.443)
AMDSBAU_54_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9061..11103)
DNA (2043bp) protein (681aa)
hypothetical protein rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEJ40864.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I466_SULAT
AMDSBAU_54_21
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(11346..11783)
DNA (438bp) protein (146aa)
seg (db=Seg db_id=seg from=90 to=104)
seg (db=Seg db_id=seg from=61 to=78)
transmembrane_regions (db=TMHMM db_id=tmhmm from=122 to=139)
transmembrane_regions (db=TMHMM db_id=tmhmm from=96 to=118)
AMDSBAU_54_22
unknown

Not on your lists

comp(11796..12020)
DNA (225bp) protein (75aa)
11796..12020 - ( gc_cont=0.564)
AMDSBAU_54_23
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12038..13039)
DNA (1002bp) protein (334aa)
ATPase AAA {ECO:0000313|EMBL:EGO63566.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
ATPase AAA n=1 Tax=Acetonema longum DSM 6540 RepID=F7NKC5_9FIRM (db=UNIREF evalue=4.8e-48 bit_score=197.6 identity=37.7 coverage=87.72455089820359)
ATPase AAA
no description (db=HMMSmart db_id=SM00382 from=112 to=246 evalue=1.2e-12 interpro_id=IPR003593 interpro_description=ATPase, AAA+ type, core GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: nucleoside-triphosphatase activity (GO:0017111))
AMDSBAU_54_24
unknown

Not on your lists

comp(13052..13273)
DNA (222bp) protein (74aa)
13052..13273 - ( gc_cont=0.541)
AMDSBAU_54_25
unknown

Not on your lists

comp(13420..13632)
DNA (213bp) protein (71aa)
13420..13632 - ( gc_cont=0.601)
AMDSBAU_54_26
unknown

Not on your lists

comp(13654..13908)
DNA (255bp) protein (85aa)
13654..13908 - ( gc_cont=0.553)
AMDSBAU_54_27
Candidatus Methanomethylophilus alvus, Candidatus Methanomethylophilus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(13972..14241)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3ILU1_9PLAN (db=UNIREF evalue=7.0e-10 bit_score=68.9 identity=44.3 coverage=84.44444444444444)
Uncharacterized protein {ECO:0000313|EMBL:AGI85836.1}; TaxID=1236689 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanomethylophilus
(db=HMMPfam db_id=PF04266 from=7 to=50 evalue=4.1e-06 interpro_id=IPR007374 interpro_description=ASCH domain)
PUA domain-like (db=superfamily db_id=SSF88697 from=1 to=43 evalue=7.0e-07 interpro_id=IPR015947 interpro_description=PUA-like domain)
AMDSBAU_54_28
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14593..14877)
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:AEP14363.1}; TaxID=338644 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
Putative uncharacterized protein orfY47 n=1 Tax=Sulfobacillus thermotolerans RepID=G5CJ86_9FIRM (db=UNIREF evalue=2.8e-09 bit_score=67.0 identity=41.9 coverage=76.84210526315789)
transmembrane_regions (db=TMHMM db_id=tmhmm from=27 to=49)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=75)
AMDSBAU_54_29

Not on your lists

comp(14966..15478)
DNA (513bp) protein (171aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK86431.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Uncharacterized protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LFY6_9RHIZ (db=UNIREF evalue=2.7e-10 bit_score=71.2 identity=46.5 coverage=48.53801169590643)
(db=HMMPfam db_id=PF10686 from=77 to=138 evalue=1.5e-09 interpro_id=IPR019627 interpro_description=Mycobacteriophage D29, Gp61)
AMDSBAU_54_30
unknown

Not on your lists

comp(15525..15827)
DNA (303bp) protein (101aa)
15525..15827 - ( gc_cont=0.525)
Displaying items 1-30 of 35 in total

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