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AMDSBAU_83

Alias: SULFO_OTHER_83

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBAU_83_1
unknown

Not on your lists

comp(3..143)
-----------------
DNA (141bp)
protein (47aa)
YgiT_finger: YgiT-type zinc finger domain (db=HMMTigr db_id=TIGR03831 from=5 to=47 evalue=2.8e-10 interpro_id=IPR022453 interpro_description=Zinc finger, YgiT-type)
AMDSBAU_83_2
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(146..466)
-----------------
DNA (321bp)
protein (107aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I2A3_DESAP
AMDSBAU_83_3
unknown

Not on your lists

comp(634..951)
-----------------
DNA (318bp)
protein (106aa)
634..951 - ( gc_cont=0.541)
AMDSBAU_83_4
unknown

Not on your lists

comp(944..1087)
-----------------
DNA (144bp)
protein (48aa)
944..1087 - ( gc_cont=0.493)
AMDSBAU_83_5
unknown

Not on your lists

comp(1129..1518)
-----------------
DNA (390bp)
protein (130aa)
seg (db=Seg db_id=seg from=97 to=119)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
AMDSBAU_83_6
unknown

Not on your lists

comp(1871..2650)
-----------------
DNA (780bp)
protein (260aa)
coiled-coil (db=Coil db_id=coil from=202 to=230 evalue=NA)
seg (db=Seg db_id=seg from=86 to=101)
AMDSBAU_83_7
unknown

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comp(2822..3145)
-----------------
DNA (324bp)
protein (108aa)
2822..3145 - ( gc_cont=0.506)
AMDSBAU_83_8
unknown

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comp(3126..3617)
-----------------
DNA (492bp)
protein (164aa)
3126..3617 - ( gc_cont=0.535)
AMDSBAU_83_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3627..4559)
-----------------
DNA (933bp)
protein (311aa)
D12 class N6 adenine-specific DNA methyltransferase rbh
D12 class N6 adenine-specific DNA methyltransferase rbh
D12 class N6 adenine-specific DNA methyltransferase superfamily n=2 Tax=Sulfobacillus acidophilus RepID=F8I481_SULAT
D12 class N6 adenine-specific DNA methyltransferase superfamily n=2 Tax=Sulfobacillus acidophilus RepID=F8I481_SULAT (db=UNIREF evalue=4.3e-91 bit_score=340.5 identity=57.8 coverage=90.67524115755627)
AMDSBAU_83_10
unknown

Not on your lists

comp(4829..5074)
-----------------
DNA (246bp)
protein (82aa)
4829..5074 - ( gc_cont=0.561)
AMDSBAU_83_11
unknown

Not on your lists

comp(5162..5440)
-----------------
DNA (279bp)
protein (93aa)
5162..5440 - ( gc_cont=0.552)
AMDSBAU_83_12
unknown

Not on your lists

comp(5437..5649)
-----------------
DNA (213bp)
protein (71aa)
5437..5649 - ( gc_cont=0.451)
AMDSBAU_83_13
unknown

Not on your lists

comp(5824..6372)
-----------------
DNA (549bp)
protein (183aa)
seg (db=Seg db_id=seg from=45 to=55)
Holliday junction resolvase RusA (db=superfamily db_id=SSF103084 from=17 to=135 evalue=1.9e-10 interpro_id=IPR008822 interpro_description=Endodeoxyribonuclease, RusA-like GO=Molecular Function: magnesium ion binding (GO:0000287), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
(db=HMMPfam db_id=PF05866 from=29 to=115 evalue=3.1e-07 interpro_id=IPR008822 interpro_description=Endodeoxyribonuclease, RusA-like GO=Molecular Function: magnesium ion binding (GO:0000287), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
AMDSBAU_83_14
unknown

Not on your lists

comp(6432..6776)
-----------------
DNA (345bp)
protein (115aa)
6432..6776 - ( gc_cont=0.588)
AMDSBAU_83_15
unknown

Not on your lists

comp(6793..7080)
-----------------
DNA (288bp)
protein (96aa)
6793..7080 - ( gc_cont=0.566)
AMDSBAU_83_16
unknown

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comp(7083..7376)
-----------------
DNA (294bp)
protein (98aa)
7083..7376 - ( gc_cont=0.571)
AMDSBAU_83_17
unknown

Not on your lists

comp(7633..7890)
-----------------
DNA (258bp)
protein (86aa)
seg (db=Seg db_id=seg from=55 to=68)
AMDSBAU_83_18
Leptospirillum ferrooxidans, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(7979..8749)
-----------------
DNA (771bp)
protein (257aa)
metallophosphoesterase
Putative metallophosphoesterase n=1 Tax=Leptospirillum ferrooxidans C2-3 RepID=I0INM2_LEPFC (db=UNIREF evalue=2.0e-49 bit_score=201.8 identity=39.1 coverage=96.10894941634241)
(db=HMMPfam db_id=PF00149 from=34 to=222 evalue=6.4e-05 interpro_id=IPR004843 interpro_description=Metallophosphoesterase domain GO=Molecular Function: hydrolase activity (GO:0016787))
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=6 to=246 evalue=7.4e-27)
AMDSBAU_83_19
RIFOXYC2_FULL_OD1_Uhrbacteria_47_19_curated, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8873..9226)
-----------------
DNA (354bp)
protein (118aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E985_FLESM
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=67)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
AMDSBAU_83_20
unknown

Not on your lists

9397..9579
-----------------
DNA (183bp)
protein (61aa)
9397..9579 + ( gc_cont=0.464)
AMDSBAU_83_21
Pseudomonas entomophila, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9566..9886
-----------------
DNA (321bp)
protein (107aa)
no description (db=HMMSmart db_id=SM00470 from=2 to=92 evalue=0.0082 interpro_id=IPR003115 interpro_description=ParB-like nuclease GO=Molecular Function: DNA binding (GO:0003677))
(db=HMMPfam db_id=PF02195 from=5 to=77 evalue=1.1e-06 interpro_id=IPR003115 interpro_description=ParB-like nuclease GO=Molecular Function: DNA binding (GO:0003677))
ParB/Sulfiredoxin (db=superfamily db_id=SSF110849 from=1 to=76 evalue=7.7e-08 interpro_id=IPR003115 interpro_description=ParB-like nuclease GO=Molecular Function: DNA binding (GO:0003677))
AMDSBAU_83_22
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

9883..10461
-----------------
DNA (579bp)
protein (193aa)
Guanylate kinase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJ76_9DELT (db=UNIREF evalue=2.9e-29 bit_score=134.4 identity=40.2 coverage=92.2279792746114)
guanylate kinase (EC:2.7.4.8)
GUANYLATE_KINASE_1 (db=PatternScan db_id=PS00856 from=36 to=53 evalue=0.0 interpro_id=IPR020590 interpro_description=Guanylate kinase, conserved site)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=2 to=183 evalue=1.1e-45)
AMDSBAU_83_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10638..11273)
-----------------
DNA (636bp)
protein (212aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8U002_SULAD
AMDSBAU_83_24
unknown

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comp(11300..11548)
-----------------
DNA (249bp)
protein (83aa)
11300..11548 - ( gc_cont=0.542)
AMDSBAU_83_25
unknown

Not on your lists

comp(11636..11845)
-----------------
DNA (210bp)
protein (70aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=4 to=21)
AMDSBAU_83_26
unknown

Not on your lists

comp(11931..12149)
-----------------
DNA (219bp)
protein (73aa)
seg (db=Seg db_id=seg from=20 to=33)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
AMDSBAU_83_27
unknown

Not on your lists

comp(12407..12526)
-----------------
DNA (120bp)
protein (40aa)
12407..12526 - ( gc_cont=0.442)
Displaying 27 items

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