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AMDSBAU_95

Alias: SULFO_OTHER_95

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBAU_95_1
unknown

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2..88
DNA (87bp) protein (29aa)
seg (db=Seg db_id=seg from=11 to=23)
AMDSBAU_95_2
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1251..1529)
DNA (279bp) protein (93aa)
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Beggiatoa sp. PS RepID=A7BYC6_9GAMM (db=UNIREF evalue=1.9e-10 bit_score=70.9 identity=43.2 coverage=83.87096774193549)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrich
CRISPR-associated protein Cas2
seg (db=Seg db_id=seg from=76 to=86)
AMDSBAU_95_3
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1532..2506)
DNA (975bp) protein (325aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichale
CRISPR-associated endonuclease Cas1 n=1 Tax=Marichromatium purpuratum 984 RepID=F9TWB0_MARPU (db=UNIREF evalue=1.9e-65 bit_score=255.4 identity=42.5 coverage=98.76923076923076)
CRISPR-associated protein Cas1
cas1: CRISPR-associated endonuclease Cas1 (db=HMMTigr db_id=TIGR00287 from=3 to=319 evalue=4.9e-65 interpro_id=IPR002729 interpro_description=CRISPR-associated protein Cas1)
AMDSBAU_95_4
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2529..3083)
DNA (555bp) protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD10608.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
CRISPR-associated protein Cas4
Putative uncharacterized protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DLT5_9GAMM (db=UNIREF evalue=5.4e-17 bit_score=93.6 identity=31.9 coverage=88.64864864864866)
(db=HMMPfam db_id=PF01930 from=22 to=176 evalue=3.5e-23 interpro_id=IPR022765 interpro_description=Dna2/Cas4, domain of unknown function DUF83)
AMDSBAU_95_5
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3077..3766)
DNA (690bp) protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD09156.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNC8_9GAMM (db=UNIREF evalue=2.8e-31 bit_score=141.4 identity=37.1 coverage=85.65217391304348)
hypothetical protein
seg (db=Seg db_id=seg from=141 to=157)
AMDSBAU_95_6
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3763..4935)
DNA (1173bp) protein (391aa)
Putative CRISPR-associated protein Csc2 {ECO:0000313|EMBL:EFK07866.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
Putative CRISPR-associated protein Csc2 n=1 Tax=delta proteobacterium NaphS2 RepID=D8F8M3_9DELT (db=UNIREF evalue=1.7e-52 bit_score=212.6 identity=39.1 coverage=80.56265984654732)
CRISPR-associated protein Csc2
seg (db=Seg db_id=seg from=374 to=386)
AMDSBAU_95_7
unknown

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comp(5021..7951)
DNA (2931bp) protein (977aa)
seg (db=Seg db_id=seg from=29 to=42)
AMDSBAU_95_8
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7948..8658)
DNA (711bp) protein (237aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD09158.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
(db=HMMPfam db_id=PF01881 from=99 to=233 evalue=1.1e-08 interpro_id=IPR002743 interpro_description=Bacteriophage c-st, CST018)
AMDSBAU_95_9
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8720..10657)
DNA (1938bp) protein (646aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD10609.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
DEAD/DEAH box helicase domain protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNC9_9GAMM (db=UNIREF evalue=1.2e-34 bit_score=154.1 identity=27.1 coverage=81.11455108359134)
hypothetical protein
seg (db=Seg db_id=seg from=236 to=246)
AMDSBAU_95_10
unknown

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comp(10769..11035)
DNA (267bp) protein (89aa)
seg (db=Seg db_id=seg from=66 to=75)
Displaying 10 items

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