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AMDSBAU_118

Alias: SULFO_OTHER_118

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBAU_118_1
unknown

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comp(28..477)
-----------------
DNA (450bp)
protein (150aa)
coiled-coil (db=Coil db_id=coil from=113 to=134 evalue=NA)
seg (db=Seg db_id=seg from=40 to=81)
seg (db=Seg db_id=seg from=121 to=131)
AMDSBAU_118_2
unknown

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comp(570..1487)
-----------------
DNA (918bp)
protein (306aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=93)
transmembrane_regions (db=TMHMM db_id=tmhmm from=255 to=277)
transmembrane_regions (db=TMHMM db_id=tmhmm from=115 to=137)
transmembrane_regions (db=TMHMM db_id=tmhmm from=194 to=216)
AMDSBAU_118_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1773..2513
-----------------
DNA (741bp)
protein (247aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I423_SULAT
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
seg (db=Seg db_id=seg from=46 to=57)
AMDSBAU_118_4
unknown

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2612..3379
-----------------
DNA (768bp)
protein (256aa)
seg (db=Seg db_id=seg from=79 to=91)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=25 evalue=6.0)
AMDSBAU_118_5
Saccharomyces cerevisiae, Saccharomyces, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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3532..5826
-----------------
DNA (2295bp)
protein (765aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium fasciculatum (strain SH3) (Slime mold) RepID=F4QF22_DICFS (db=UNIREF evalue=4.4e-20 bit_score=105.9 identity=24.2 coverage=71.50326797385621)
hypothetical protein
seg (db=Seg db_id=seg from=309 to=323)
seg (db=Seg db_id=seg from=659 to=674)
AMDSBAU_118_6
unknown

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5879..5995
-----------------
DNA (117bp)
protein (39aa)
5879..5995 + ( gc_cont=0.598)
AMDSBAU_118_7
unknown

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6052..6870
-----------------
DNA (819bp)
protein (273aa)
seg (db=Seg db_id=seg from=43 to=52)
AMDSBAU_118_8
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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6921..7358
-----------------
DNA (438bp)
protein (146aa)
Signal protein n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2KCX2_9GAMM (db=UNIREF evalue=8.4e-13 bit_score=79.3 identity=34.5 coverage=88.35616438356165)
diguanylate cyclase/phosphodiesterase
EAL domain-like (db=superfamily db_id=SSF141868 from=7 to=145 evalue=1.0e-16 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, EAL domain)
(db=HMMPfam db_id=PF00563 from=7 to=142 evalue=1.1e-14 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, EAL domain)
AMDSBAU_118_9
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7534..7932
-----------------
DNA (399bp)
protein (133aa)
transposase
Transposase n=4 Tax=Brevibacillus RepID=J3A6W9_9BACL (db=UNIREF evalue=1.0e-49 bit_score=201.8 identity=71.5 coverage=96.99248120300751)
(db=HMMPfam db_id=PF01797 from=13 to=129 evalue=1.7e-40 interpro_id=IPR002686 interpro_description=Transposase IS200-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
Transposase IS200-like (db=superfamily db_id=SSF143422 from=2 to=130 evalue=3.8e-39 interpro_id=IPR002686 interpro_description=Transposase IS200-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
AMDSBAU_118_10
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7935..9029
-----------------
DNA (1095bp)
protein (365aa)
Transposase IS605 OrfB family protein n=1 Tax=Thermus sp. RL RepID=H7GG72_9DEIN
Transposase IS605 OrfB family protein n=1 Tax=Thermus sp. RL RepID=H7GG72_9DEIN (db=UNIREF evalue=1.7e-94 bit_score=352.1 identity=51.8 coverage=98.63013698630137)
transposase IS605 OrfB family
transposase IS605 OrfB family
Displaying 10 items

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