ggKbase home page

AMDSBAU_6_26

Organism: Sulfo_Unknown_Bin

partial RP 4 / 55 MC: 1 BSCG 5 / 51 ASCG 0 / 38
Location: 20753..21667

Top 3 Functional Annotations

Value Algorithm Source
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 285.0
  • Bit_score: 158
  • Evalue 3.10e-36
RNA polymerase sigma factor RpoD n=8 Tax=Thermotoga RepID=RPOD_THEMA similarity UNIREF
DB: UNIREF90
  • Identity: 34.7
  • Coverage: null
  • Bit_score: 157
  • Evalue 4.50e-36
SIGMA70_2 (db=PatternScan db_id=PS00716 from=261 to=287 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: PatternScan
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_OD1_42_19 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGCTGCCGAAGCCCATCACGACTGAGGCTGACCGTTGGGACCTTCCCGACACGCTCTTGGTGCCCATGGAGTCCTTGGATGCCTATTTCGCCCGAATTCATGCCATCCCGGTACTGTCTTCTGAAGAGGAGACGCTGTTGGGCGAGGCCGTGCAACGGGGCGACCGCGACGCCGCCATTCGGCTGGCGACACACAACTTGCGATACGCGGCCCACCTAGCGCGCAAGTGGGAGGGGCGGCCGACCACTGAGTCGGTATGGTCGCTTGGCGATGCCGTGCAAGCCGCCAACATGGGACTCTGGTCGGCTGCGCACCGCTTTGACCCGGCGGTAGCGCGCTTCAGCACGTACGCAACCTGGTGGGTCAGACAGGCTTGGAACCGCGCCCGCAATGATTTTCTCTGGCAGGTTCGCTTGCCGGCGCATGCCGCCGACGAGTGGCGCGTCTATCAACGGGCCGTGGCTGCGTGGAGCGGATCGCACGGCACGGAACCGACAGCGGACATGTTGGTAAATCTCCTCGGATGGCCGCTGAGCCGTGTCACGTTTTGGCAGCACTGGGCTGCGACGAATCATCGATTGGCCTCGCTGGATGCGCTCATCGCGGATGGAGATACCCCCTTGGGCGATCTGTTGGCCGCGCCGGACGACACCAGCGTGTGGCATCAGATGGCGCACGTAGCACAGAAAGATGCCGTGGACCAGTTACTGCAGCAGCAATTGACGCCCCGCGAAGCGGATGTGCTGCGGCTCCGGTATGGTCTTGTGGGCGCACCGATGACGCTGCAAGAAGTGGGGGATGTCTTTCGTCTCACCCGGGAGCGCATTCGGCAAATCGAAGCCCGGGCCTTACAGAAACTCCGCATCGCGGTCGGGCAACATCCTGAGTGGGAGATTCGCGATTTGATCAGTTAA
PROTEIN sequence
Length: 305
MLPKPITTEADRWDLPDTLLVPMESLDAYFARIHAIPVLSSEEETLLGEAVQRGDRDAAIRLATHNLRYAAHLARKWEGRPTTESVWSLGDAVQAANMGLWSAAHRFDPAVARFSTYATWWVRQAWNRARNDFLWQVRLPAHAADEWRVYQRAVAAWSGSHGTEPTADMLVNLLGWPLSRVTFWQHWAATNHRLASLDALIADGDTPLGDLLAAPDDTSVWHQMAHVAQKDAVDQLLQQQLTPREADVLRLRYGLVGAPMTLQEVGDVFRLTRERIRQIEARALQKLRIAVGQHPEWEIRDLIS*