ggKbase home page

AMDSBAU_20_15

Organism: Sulfo_Unknown_Bin

partial RP 4 / 55 MC: 1 BSCG 5 / 51 ASCG 0 / 38
Location: comp(17460..18263)

Top 3 Functional Annotations

Value Algorithm Source
srl; DeoR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 250.0
  • Bit_score: 176
  • Evalue 9.80e-42
Transcriptional regulator, DeoR family n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FFB1_SACEN (db=UNIREF evalue=1.2e-41 bit_score=176.0 identity=39.2 coverage=92.16417910447761) similarity UNIREF
DB: UNIREF
  • Identity: 39.0
  • Coverage: 92.0
  • Bit_score: 176
  • Evalue 1.00e+00
HTH_DEOR_1 (db=PatternScan db_id=PS00894 from=6 to=40 evalue=0.0 interpro_id=IPR018356 interpro_description=Transcription regulator, HTH DeoR-type, conserved site GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Saccharopolyspora erythraea → Saccharopolyspora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGAAAGCATCTAAACGACAGAAGCAGATTTTAGACTTGGTAGCAAGGGATGGTGCTCAGACTGTGGATCATCTTTCTCAGTACTTAGGTGTGTCGGTAGCTACTATTCGTCGGGATCTGGCAGCGCTCGAGAGCGAAGGACGTGTGATTCGTACACATGGAGGCGTTCGGGCCGGCATACCCCATTCGGAACTCACTATTGCCGAGAAAGCGATGCAGAACCAGTCCCAGAAAATGGGAATTGCCCGACTGGCTGCCCGGAAAGTCCATGATTTTGACACTATTATTGTTGACGCCGGCACTACGACAGGGCTTTTCGCTAAGATGCTTGCCGGACAAGATTTAACTGTGATAACCAATAGCATTACAGCGTTGAGTATCCTTTTGAATAGACGGGACATCACCGTAATGATCTTAGGAGGGACATTGAGATATGTAAATCAAGCTATTATTGGGTCATCAGCGATAAATCAATTAAGAAACGTATTTGCGGATGGGGCTTTCATTGGCGCGTATGAATTTGTGATCGGACATGGTATCACGTCGCCAACACCTTCTCAAGCTGCGCTGAAAAGTGCGATGATGGAATCCGCCAAGGAGATATACATTTTGGTTGATTCGAGCAAGTTTGGTCAACCGACCTATAAGTACATTTCACCGGTACCTCAACGGGCCACCATAATTACTGATGATGGCATTCATCCTTCGATTGTCCAAGCATTGCAGCAGAATCATTTGCAGGTAGTAATGGCTCAACCTCATACCGCGATTGATGAGAAGAGCATGGAGAGTCCCGTTAACTAG
PROTEIN sequence
Length: 268
MKASKRQKQILDLVARDGAQTVDHLSQYLGVSVATIRRDLAALESEGRVIRTHGGVRAGIPHSELTIAEKAMQNQSQKMGIARLAARKVHDFDTIIVDAGTTTGLFAKMLAGQDLTVITNSITALSILLNRRDITVMILGGTLRYVNQAIIGSSAINQLRNVFADGAFIGAYEFVIGHGITSPTPSQAALKSAMMESAKEIYILVDSSKFGQPTYKYISPVPQRATIITDDGIHPSIVQALQQNHLQVVMAQPHTAIDEKSMESPVN*