ggKbase home page

AMDSBA2_4

Alias: SULFO_6_4

Search features with annotation key words

Displaying items 1-30 of 32 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA2_4_1
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58..1518)
DNA (1461bp) protein (487aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:KGK90172.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. H
Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EI37_9CLOT
Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EI37_9CLOT (db=UNIREF evalue=2.9e-150 bit_score=537.7 identity=55.2 coverage=95.89322381930184)
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
AMDSBA2_4_2
unknown

Not on your lists

comp(1914..2396)
DNA (483bp) protein (161aa)
seg (db=Seg db_id=seg from=18 to=23)
(db=HMMPfam db_id=PF00582 from=4 to=154 evalue=1.4e-10 interpro_id=IPR006016 interpro_description=UspA GO=Biological Process: response to stress (GO:0006950))
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=2 to=154 evalue=1.5e-13 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
Adenine nucleotide alpha hydrolases-like (db=superfamily db_id=SSF52402 from=3 to=155 evalue=2.5e-18)
AMDSBA2_4_3
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(2483..3124)
DNA (642bp) protein (214aa)
flavin-nucleotide-binding protein Tax=RBG_16_Actinobacteria_68_21_curated
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I7F3_SULAT
FMN-binding split barrel (db=superfamily db_id=SSF50475 from=17 to=187 evalue=1.1e-39 interpro_id=IPR009002 interpro_description=FMN-binding split barrel-related)
AMDSBA2_4_4
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3508..5562
DNA (2055bp) protein (685aa)
Uncharacterized protein {ECO:0000313|EMBL:EPZ45239.1}; TaxID=1356854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoterrestr
protease (EC:3.4.21.83)
protease (EC:3.4.21.83)
Protease 2 n=1 Tax=Moraxella lacunata RepID=PTRB_MORLA
AMDSBA2_4_5
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5617..6639)
DNA (1023bp) protein (341aa)
ADP-ribosylation/Crystallin J1
ADP-ribosylation/Crystallin J1 {ECO:0000313|EMBL:ACL47619.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425
ADP-ribosylation/Crystallin J1 n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HYX1_CYAP4 (db=UNIREF evalue=1.6e-70 bit_score=272.3 identity=44.2 coverage=97.36070381231671)
ADP-RIBOSYLGLYCOHYDROLASE (db=HMMPanther db_id=PTHR16222 from=1 to=331 evalue=2.4e-12)
AMDSBA2_4_6
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6881..7564
DNA (684bp) protein (228aa)
Phosphoadenosine phosphosulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; EC=1.8.4.8 {ECO:0000256|HAMAP-Rule:MF_00063};; 3'-phosphoadenylylsulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS
Phosphoadenosine phosphosulfate reductase n=1 Tax=Kyrpidia tusciae DSM 2912 RepID=D5WS86_BACT2 (db=UNIREF evalue=3.4e-61 bit_score=240.7 identity=52.4 coverage=98.68421052631578)
adenylylsulfate reductase (EC:1.8.4.8)
FAD SYNTHETASE-RELATED (FMN ADENYLYLTRANSFERASE) (db=HMMPanther db_id=PTHR23293 from=124 to=199 evalue=1.7e-06)
AMDSBA2_4_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7561..8640
DNA (1080bp) protein (360aa)
sulfate adenylyltransferase (EC:2.7.7.4)
sulfate adenylyltransferase (EC:2.7.7.4)
Plasmid, complete sequence {ECO:0000313|EMBL:AEW06995.1}; EC=2.7.7.4 {ECO:0000313|EMBL:AEW06995.1};; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. I
Sulfate adenylyltransferase n=2 Tax=Sulfobacillus acidophilus RepID=G8U1R7_SULAD
AMDSBA2_4_8
Thermoactinomyces sp. Gus2-1, Thermoactinomyces, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8779..9858)
DNA (1080bp) protein (360aa)
Ribulose 5-phosphate epimerase {ECO:0000313|EMBL:KFZ40243.1}; TaxID=1535750 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Thermoactinomyces.;" source="Thermoactinomyces s
class II aldolase/adducin family protein
class II aldolase/adducin family protein
Class II aldolase/adducin family protein n=2 Tax=Thermaerobacter RepID=E6SHP1_THEM7
AMDSBA2_4_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9975..10346)
DNA (372bp) protein (124aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I786_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEJ39957.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
AMDSBA2_4_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11294..11875)
DNA (582bp) protein (194aa)
lactate utilization protein B/C
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I813_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEW05583.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
seg (db=Seg db_id=seg from=94 to=126)
AMDSBA2_4_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11868..13289)
DNA (1422bp) protein (474aa)
Iron-sulfur cluster binding protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I814_SULAT (db=UNIREF evalue=1.7e-139 bit_score=501.9 identity=54.1 coverage=99.15611814345992)
lactate utilization protein B/C
lactate utilization protein B/C
Iron-sulfur cluster binding protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I814_SULAT
AMDSBA2_4_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13294..14088)
DNA (795bp) protein (265aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TSX0_SULAD
Uncharacterized protein {ECO:0000313|EMBL:AEW05585.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
(db=HMMPfam db_id=PF02754 from=31 to=86 evalue=2.4e-06 interpro_id=IPR004017 interpro_description=Cysteine-rich domain)
AMDSBA2_4_13
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(14134..14988)
DNA (855bp) protein (285aa)
fumarylacetoacetate hydrolase family protein
Fumarylacetoacetate hydrolase family protein {ECO:0000313|EMBL:BAM00851.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea ae
Fumarylacetoacetate hydrolase family protein n=1 Tax=Caldilinea aerophila DSM 14535 = NBRC 104270 RepID=I0I6G3_CALAS (db=UNIREF evalue=8.0e-76 bit_score=289.7 identity=64.0 coverage=72.98245614035088)
FUMARYLACETOACETATE HYDROLASE (db=HMMPanther db_id=PTHR11820 from=65 to=284 evalue=1.9e-90)
AMDSBA2_4_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15254..16330
DNA (1077bp) protein (359aa)
tartrate dehydrogenase (EC:4.1.1.73)
tartrate dehydrogenase (EC:4.1.1.73)
Uncharacterized protein {ECO:0000313|EMBL:AEW04353.1}; EC=4.1.1.73 {ECO:0000313|EMBL:AEW04353.1};; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Inc
Tartrate dehydrogenase n=2 Tax=Sulfobacillus acidophilus RepID=F8I6X4_SULAT
AMDSBA2_4_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16325..17608)
DNA (1284bp) protein (428aa)
major facilitator superfamily protein
major facilitator superfamily protein
Major facilitator superfamily permease {ECO:0000313|EMBL:AEJ39494.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;
Major facilitator superfamily permease n=2 Tax=Sulfobacillus acidophilus RepID=F8I390_SULAT
AMDSBA2_4_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17698..18666)
DNA (969bp) protein (323aa)
inosine/uridine-preferring nucleoside hydrolase
Uncharacterized protein {ECO:0000313|EMBL:AEW05188.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
Inosine-uridine preferring nucleoside hydrolase-domain-containing protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I8B4_SULAT (db=UNIREF evalue=1.7e-74 bit_score=285.4 identity=49.7 coverage=91.3312693498452)
seg (db=Seg db_id=seg from=94 to=109)
AMDSBA2_4_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18685..19119)
DNA (435bp) protein (145aa)
hypothetical protein
CBS domain containing protein {ECO:0000313|EMBL:AEJ39478.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source=
CBS domain containing protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I374_SULAT (db=UNIREF evalue=2.2e-50 bit_score=204.1 identity=71.0 coverage=98.62068965517241)
CBS-domain (db=superfamily db_id=SSF54631 from=63 to=119 evalue=1.0e-15)
AMDSBA2_4_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19196..20734)
DNA (1539bp) protein (513aa)
Na+/solute symporter
Na+/solute symporter
Na+/solute symporter n=2 Tax=Sulfobacillus acidophilus RepID=F8I2J6_SULAT
Na+/solute symporter {ECO:0000313|EMBL:AEJ39429.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobac
AMDSBA2_4_19
unknown

Not on your lists

comp(20916..21590)
DNA (675bp) protein (225aa)
20916..21590 - ( gc_cont=0.550)
AMDSBA2_4_20
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21785..22279)
DNA (495bp) protein (165aa)
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ADG88799.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC
NADPH-dependent FMN reductase n=1 Tax=Thermobispora bispora DSM 43833 RepID=D6Y2F0_THEBD (db=UNIREF evalue=4.6e-52 bit_score=209.9 identity=63.7 coverage=94.54545454545455)
seg (db=Seg db_id=seg from=79 to=94)
AMDSBA2_4_21
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22745..24166
DNA (1422bp) protein (474aa)
Uncharacterized protein {ECO:0000313|EMBL:KHK99922.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
amino acid permease
Amino acid permease-associated region n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U496_9CHLR (db=UNIREF evalue=1.3e-54 bit_score=219.9 identity=30.5 coverage=95.56962025316456)
seg (db=Seg db_id=seg from=134 to=148)
AMDSBA2_4_22
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24053..24586)
DNA (534bp) protein (178aa)
NADH ubiquinone oxidoreductase 20 kDa subunit {ECO:0000313|EMBL:EHK55571.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" sou
NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUM5_9RHIZ (db=UNIREF evalue=1.8e-33 bit_score=148.3 identity=57.0 coverage=70.78651685393258)
NADH ubiquinone oxidoreductase, 20 kDa subunit
NADH DEHYDROGENASE (db=HMMPanther db_id=PTHR11995 from=15 to=136 evalue=1.3e-34 interpro_id=IPR014406 interpro_description=[NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB GO=Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA2_4_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24610..26079)
DNA (1470bp) protein (490aa)
NADH-ubiquinone oxidoreductase chain 49kDa
NADH-ubiquinone oxidoreductase chain 49kDa
Formate hydrogenlyase subunit 5 n=2 Tax=Sulfobacillus acidophilus RepID=F8I7T7_SULAT
Formate hydrogenlyase subunit 5 {ECO:0000313|EMBL:AEJ38794.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" sourc
AMDSBA2_4_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26054..27391)
DNA (1338bp) protein (446aa)
hypothetical protein
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I7T6_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEJ38793.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA2_4_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27396..28019)
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I7T5_SULAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW06500.1}; Flags: Precursor;; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillu
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=107)
AMDSBA2_4_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28021..28935)
DNA (915bp) protein (305aa)
formate hydrogenlyase subunit 4
NADH dehydrogenase {ECO:0000313|EMBL:AEJ38791.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacil
NADH dehydrogenase n=2 Tax=Sulfobacillus acidophilus RepID=F8I7T4_SULAT (db=UNIREF evalue=5.9e-69 bit_score=266.9 identity=50.7 coverage=94.42622950819673)
seg (db=Seg db_id=seg from=175 to=186)
AMDSBA2_4_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28951..30837)
DNA (1887bp) protein (629aa)
hyfB; NADH/ubiquinone/plastoquinone
hyfB; NADH/ubiquinone/plastoquinone
NADH/Ubiquinone/plastoquinone (Complex I) {ECO:0000313|EMBL:AEJ38790.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillu
NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Sulfobacillus acidophilus RepID=F8I7T3_SULAT
AMDSBA2_4_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30890..31207)
DNA (318bp) protein (106aa)
Transcriptional regulator, ArsR family n=2 Tax=Sulfobacillus acidophilus RepID=F8I7T2_SULAT (db=UNIREF evalue=3.2e-30 bit_score=136.7 identity=67.3 coverage=94.33962264150944)
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEJ38789.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;
seg (db=Seg db_id=seg from=19 to=29)
AMDSBA2_4_29
Bacillus sp. TH008, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31349..32692
DNA (1344bp) protein (448aa)
MFS transporter {ECO:0000313|EMBL:KKB73961.1}; TaxID=1609979 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. TH008.;"
MFS transporter
Major facilitator superfamily protein YwoD n=1 Tax=Bacillus sonorensis L12 RepID=M5P2H5_9BACI
seg (db=Seg db_id=seg from=254 to=273)
AMDSBA2_4_30
unknown

Not on your lists

comp(32980..33309)
DNA (330bp) protein (110aa)
32980..33309 - ( gc_cont=0.527)
Displaying items 1-30 of 32 in total

View Taxonomy