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AMDSBA2_66

Alias: SULFO_6_66

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA2_66_1
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2..625
DNA (624bp) protein (208aa)
Ppx/GppA phosphatase
Ppx/GppA phosphatase {ECO:0000313|EMBL:ACT03095.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
Ppx/GppA phosphatase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8B5_PAESJ (db=UNIREF evalue=7.0e-13 bit_score=80.1 identity=28.0 coverage=89.42307692307693)
seg (db=Seg db_id=seg from=183 to=194)
AMDSBA2_66_2
unknown

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736..915
DNA (180bp) protein (60aa)
736..915 + ( gc_cont=0.600)
AMDSBA2_66_3
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1206..1943
DNA (738bp) protein (246aa)
thymidylate kinase
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=696281 species="Bacteria; Firmicutes; Clostrid
Thymidylate kinase n=1 Tax=Desulfotomaculum ruminis DSM 2154 RepID=F6DSM2_DESRL (db=UNIREF evalue=2.7e-48 bit_score=198.0 identity=48.1 coverage=86.1788617886179)
(db=HMMPfam db_id=PF02223 from=16 to=204 evalue=2.4e-20 interpro_id=IPR018094 interpro_description=Thymidylate kinase GO=Molecular Function: thymidylate kinase activity (GO:0004798), Molecular Function: ATP binding (GO:0005524), Biological Process: dTDP biosynthetic process (GO:0006233))
AMDSBA2_66_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1946..2629
DNA (684bp) protein (228aa)
thymidylate kinase
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=351605 species="Bacteria; Proteobacteria; Delt
Thymidylate kinase n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G4V0_GEOUR (db=UNIREF evalue=8.7e-17 bit_score=93.2 identity=32.1 coverage=92.98245614035088)
(db=HMMPfam db_id=PF02223 from=26 to=162 evalue=1.5e-14 interpro_id=IPR018094 interpro_description=Thymidylate kinase GO=Molecular Function: thymidylate kinase activity (GO:0004798), Molecular Function: ATP binding (GO:0005524), Biological Process: dTDP biosynthetic process (GO:0006233))
AMDSBA2_66_5
unknown

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2647..3195
DNA (549bp) protein (183aa)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=1 to=181 evalue=1.0e-25)
(db=HMMPfam db_id=PF01966 from=10 to=124 evalue=1.3e-07 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain GO=Molecular Function: phosphoric diester hydrolase activity (GO:0008081), Molecular Function: metal ion binding (GO:0046872))
AMDSBA2_66_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3178..4821)
DNA (1644bp) protein (548aa)
sfcA; malate dehydrogenase rbh
sfcA; malate dehydrogenase rbh
Malate dehydrogenase (Oxaloacetate-decarboxylating) n=2 Tax=Sulfobacillus acidophilus RepID=F8I4M5_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEW04223.1}; EC=1.1.1.40 {ECO:0000313|EMBL:AEW04223.1};; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Inc
AMDSBA2_66_7
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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4897..5415
DNA (519bp) protein (173aa)
sigH; RNA polymerase sigma-30 factor (sigma(H))
RNA polymerase sporulation specific sigma factor SigH n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LRF3_TEPAE
RNA polymerase sigma-30 factor (Sigma(H)) {ECO:0000313|EMBL:CCP27167.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;"
HTH_LUXR_1 (db=PatternScan db_id=PS00622 from=137 to=164 evalue=0.0 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
AMDSBA2_66_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5412..6428)
DNA (1017bp) protein (339aa)
cytochrome oxidase assembly
cytochrome oxidase assembly
Cytochrome oxidase assembly n=2 Tax=Sulfobacillus acidophilus RepID=F8I7H2_SULAT
Cytochrome oxidase assembly {ECO:0000313|EMBL:AEJ41239.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="S
AMDSBA2_66_9
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6607..7611)
DNA (1005bp) protein (335aa)
acetoacetyl-CoA synthase
acetoacetyl-CoA synthase
Acetoacetyl-CoA synthase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJ65_THEM7
Acetoacetyl-CoA synthase {ECO:0000313|EMBL:ADU52089.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="The
AMDSBA2_66_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8818..9696
DNA (879bp) protein (293aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ41412.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TYW9_SULAD
seg (db=Seg db_id=seg from=267 to=279)
AMDSBA2_66_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9907..10239)
DNA (333bp) protein (111aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I5T5_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEJ39777.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Dimeric alpha+beta barrel (db=superfamily db_id=SSF54909 from=54 to=108 evalue=4.7e-09 interpro_id=IPR011008 interpro_description=Dimeric alpha-beta barrel)
AMDSBA2_66_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10252..10884)
DNA (633bp) protein (211aa)
stage II sporulation protein M
Stage II sporulation protein M {ECO:0000313|EMBL:AEJ41420.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source
Stage II sporulation protein M n=2 Tax=Sulfobacillus acidophilus RepID=F8I8X3_SULAT (db=UNIREF evalue=4.2e-58 bit_score=230.3 identity=54.6 coverage=96.6824644549763)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=104)
AMDSBA2_66_13
unknown

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comp(10919..11665)
DNA (747bp) protein (249aa)
seg (db=Seg db_id=seg from=98 to=112)
(db=HMMPfam db_id=PF01381 from=128 to=179 evalue=1.9e-05 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=28 to=80 evalue=1.6e-07 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
(db=HMMPfam db_id=PF01381 from=32 to=81 evalue=1.3e-08 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
AMDSBA2_66_14
unknown

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12375..12536
DNA (162bp) protein (54aa)
12375..12536 + ( gc_cont=0.457)
AMDSBA2_66_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12472..12816)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I8X5_SULAT (db=UNIREF evalue=6.4e-08 bit_score=62.8 identity=32.4 coverage=87.82608695652175)
Sm-like ribonucleoproteins (db=superfamily db_id=SSF50182 from=44 to=103 evalue=1.2e-11 interpro_id=IPR010920 interpro_description=Like-Sm ribonucleoprotein (LSM)-related domain)
no description (db=Gene3D db_id=G3DSA:2.30.30.100 from=39 to=113 evalue=1.4e-08)
AMDSBA2_66_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12816..13271)
DNA (456bp) protein (152aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ41423.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I8X6_SULAT
Displaying 16 items

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