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AMDSBA2_71

Alias: SULFO_6_71

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA2_71_1
unknown

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1..99
DNA (99bp) protein (33aa)
1..99 + ( gc_cont=0.455)
AMDSBA2_71_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(129..728)
DNA (600bp) protein (200aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8U002_SULAD
Uncharacterized protein {ECO:0000313|EMBL:AEW04171.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
seg (db=Seg db_id=seg from=87 to=105)
AMDSBA2_71_3
unknown

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comp(836..1003)
DNA (168bp) protein (56aa)
836..1003 - ( gc_cont=0.518)
AMDSBA2_71_4
unknown

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comp(1000..1521)
DNA (522bp) protein (174aa)
seg (db=Seg db_id=seg from=64 to=73)
AMDSBA2_71_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2348..2848
DNA (501bp) protein (167aa)
phage repressor like transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AEW04603.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
Phage repressor like transcriptional regulator, XRE family n=2 Tax=Sulfobacillus acidophilus RepID=G8TU12_SULAD (db=UNIREF evalue=2.6e-18 bit_score=97.8 identity=37.4 coverage=95.80838323353294)
(db=HMMPfam db_id=PF01381 from=6 to=60 evalue=1.6e-19 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
AMDSBA2_71_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3588..4112
DNA (525bp) protein (175aa)
phage repressor like transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AEW04603.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
Phage repressor like transcriptional regulator, XRE family n=2 Tax=Sulfobacillus acidophilus RepID=G8TU12_SULAD (db=UNIREF evalue=3.1e-22 bit_score=110.9 identity=39.0 coverage=85.71428571428571)
(db=HMMPfam db_id=PF01381 from=6 to=60 evalue=1.1e-17 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
AMDSBA2_71_7
Thermoanaerobacterium aotearoense, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(4572..7397)
DNA (2826bp) protein (942aa)
DEAD/DEAH box helicase
DEAD-like helicase n=2 Tax=Thermoanaerobacterium RepID=I3WBQ1_THESW
DEAD/DEAH box helicase {ECO:0000313|EMBL:ETO39164.1}; TaxID=1421016 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaeroba
DEAD-like helicase n=1 Tax=Thermoanaerobacterium saccharolyticum JW/SL-YS485 RepID=I3WBQ1_THESW (db=UNIREF evalue=3.5e-112 bit_score=412.1 identity=33.5 coverage=82.37791932059449)
AMDSBA2_71_8
unknown

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comp(7416..7877)
DNA (462bp) protein (154aa)
seg (db=Seg db_id=seg from=63 to=79)
AMDSBA2_71_9

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comp(8010..8528)
DNA (519bp) protein (173aa)
Uncharacterized protein {ECO:0000313|EMBL:CBH99686.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PXM7_9ZZZZ (db=UNIREF evalue=1.2e-13 bit_score=82.4 identity=32.1 coverage=98.84393063583815)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=12 to=139 evalue=1.7e-07)
N12N6MTFRASE (db=FPrintScan db_id=PR00507 from=91 to=103 evalue=3.1e-05 interpro_id=IPR002296 interpro_description=N6 adenine-specific DNA methyltransferase, N12 class GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: methyltransferase activity (GO:0008168), Biological Process: methylation (GO:0032259))
AMDSBA2_71_10
unknown

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comp(8602..9201)
DNA (600bp) protein (200aa)
seg (db=Seg db_id=seg from=147 to=167)
AMDSBA2_71_11
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9232..12066)
DNA (2835bp) protein (945aa)
TnpA family transposase {ECO:0000313|EMBL:AEP14310.1}; TaxID=338644 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
TnpA family transposase n=1 Tax=Sulfobacillus thermotolerans RepID=G5CJ33_9FIRM
TnpA family transposase n=1 Tax=Sulfobacillus thermotolerans RepID=G5CJ33_9FIRM (db=UNIREF evalue=0.0 bit_score=1610.9 identity=84.6 coverage=99.7883597883598)
transposase Tn3
AMDSBA2_71_12
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12372..12458
DNA (87bp) protein (29aa)
Resolvase-like protein {ECO:0000313|EMBL:AEP14309.1}; TaxID=338644 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfoba
RECOMBINASES_1 (db=PatternScan db_id=PS00397 from=5 to=13 evalue=0.0 interpro_id=IPR006118 interpro_description=Recombinase, conserved site GO=Molecular Function: recombinase activity (GO:0000150), Biological Process: DNA recombination (GO:0006310))
(db=HMMPfam db_id=PF00239 from=2 to=29 evalue=2.9e-06 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=27 evalue=5.0)
Displaying 12 items

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