ggKbase home page

AMDSBA2_106

Alias: SULFO_6_106

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA2_106_1
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1520..2098)
DNA (579bp) protein (193aa)
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AJK54010.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
Predicted protein n=1 Tax=Streptomyces roseosporus NRRL 15998 RepID=D6APK9_STRFL
PIN domain-like (db=superfamily db_id=SSF88723 from=1 to=130 evalue=1.6e-06)
AMDSBA2_106_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2101..2562)
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I8L9_SULAT
excisionase family DNA binding domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AEW05624.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
excise: DNA binding domain, excisionase fami (db=HMMTigr db_id=TIGR01764 from=73 to=121 evalue=4.4e-14 interpro_id=IPR010093 interpro_description=Excisionase/Xis, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
AMDSBA2_106_3
RIFOXYA1_FULL_Paenibacillus_44_5_curated, Firmicutes, Bacteria

Not on your lists

comp(3333..4208)
DNA (876bp) protein (292aa)
hypothetical protein Tax=RIFOXYA1_FULL_Paenibacillus_44_5_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=58 to=72)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=6.0)
AMDSBA2_106_4
unknown

Not on your lists

4293..4505
DNA (213bp) protein (71aa)
4293..4505 + ( gc_cont=0.526)
AMDSBA2_106_5
unknown

Not on your lists

4447..4710
DNA (264bp) protein (88aa)
4447..4710 + ( gc_cont=0.515)
AMDSBA2_106_6
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(5194..5736)
DNA (543bp) protein (181aa)
HEPN domain-containing protein Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
HEPN domain protein alias=ACD7_212880.3957.5_3,ACD7_212880.3957.5G0003,ACD7_C00013G00003 id=129698 tax=ACD7 species=Caldicellulosiruptor saccharolyticus genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
(db=HMMPfam db_id=PF05168 from=48 to=151 evalue=1.4e-19 interpro_id=IPR007842 interpro_description=HEPN)
Nucleotidyltransferase substrate binding subunit/domain (db=superfamily db_id=SSF81593 from=48 to=156 evalue=2.0e-14)
AMDSBA2_106_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6449..7294
DNA (846bp) protein (282aa)
hypothetical protein rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEJ38258.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I335_SULAT
AMDSBA2_106_8
unknown

Not on your lists

comp(7527..7940)
DNA (414bp) protein (138aa)
seg (db=Seg db_id=seg from=49 to=64)
AMDSBA2_106_9
unknown

Not on your lists

comp(8457..8597)
DNA (141bp) protein (47aa)
8457..8597 - ( gc_cont=0.504)
AMDSBA2_106_10
unknown

Not on your lists

comp(8696..9151)
DNA (456bp) protein (152aa)
8696..9151 - ( gc_cont=0.500)
AMDSBA2_106_11
unknown

Not on your lists

comp(9181..9315)
DNA (135bp) protein (45aa)
9181..9315 - ( gc_cont=0.489)
AMDSBA2_106_12
unknown

Not on your lists

9347..9661
DNA (315bp) protein (105aa)
9347..9661 + ( gc_cont=0.505)
Displaying 12 items

View Taxonomy