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Candidatus_Parvarchaeum_acidophilus_ARMAN-5_baker2010

amd_refseq_Candidatus_Parvarchaeum_acidophilus_35_1
In projects: amd_refseq  |  AMD_2019  |  alphabet_plasma  |  archaea_ggkbase

Consensus taxonomy: Candidatus Parvarchaeum acidophilus  →  Candidatus Parvarchaeum  →  Parvarchaeota  →  Archaea

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 67.59 Kbp Bin length: 920.27 Kbp GC content: 34.89 %
Contigs count: 73 Features count: 1086 rRNAs count: 0 tRNAs count: 39

Genome completeness

near complete RP 31 / 55 BSCG 16 / 51 MC: 2 ASCG 34 / 38 MC: 5

Description

Candidatus Parvarchaeum acidophilus ARMAN-5 genomic scaffold Scf_ARM5contig_4776, whole genome shotgun sequence

Displaying items 1-50 of 73 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
GG745599 8 6188 bp 34.23 1.00 0.00
GG745600 7 6163 bp 35.19 1.00 0.00
GG745601 6 4659 bp 31.14 1.00 0.00
GG745606 6 8655 bp 37.20 1.00 0.00
GG745607 13 8682 bp 35.01 1.00 0.00
GG745608 11 8158 bp 35.71 1.00 0.00
GG745609 7 8134 bp 34.98 1.00 0.00
GG745612 27 15911 bp 34.05 1.00 0.00
GG745613 12 12385 bp 38.08 1.00 0.00
GG745614 27 23617 bp 35.71 1.00 0.00
GG745615 38 32415 bp 35.94 1.00 0.00
GG745544 23 20074 bp 35.43 1.00 0.00
GG745546 79 67586 bp 35.95 1.00 0.00
GG745548 38 28164 bp 32.93 1.00 0.00
GG745552 25 20213 bp 33.04 1.00 0.00
GG745553 60 53394 bp 34.79 1.00 0.00
GG745555 43 37614 bp 36.72 1.00 0.00
GG745559 29 22801 bp 34.74 1.00 0.00
GG745560 2 1319 bp 36.39 1.00 0.00
GG745561 1 1112 bp 32.73 1.00 0.00
GG745562 3 1385 bp 35.74 1.00 0.00
GG745563 1 1847 bp 35.19 1.00 0.00
GG745564 3 1621 bp 38.19 1.00 0.00
GG745565 2 1941 bp 35.34 1.00 0.00
GG745566 3 1715 bp 30.55 1.00 0.00
GG745567 4 2633 bp 31.83 1.00 0.00
GG745570 3 2593 bp 36.37 1.00 0.00
GG745572 2 1570 bp 37.64 1.00 0.00
GG745573 5 2360 bp 34.66 1.00 0.00
GG745574 8 4832 bp 34.09 1.00 0.00
GG745579 8 3055 bp 32.41 1.00 0.00
GG745584 6 5284 bp 33.02 1.00 0.00
GG745589 8 5464 bp 33.29 1.00 0.00
GG745592 7 6674 bp 35.24 1.00 0.00
GG745594 5 7269 bp 36.25 1.00 0.00
GG745595 6 5178 bp 33.57 1.00 0.00
GG745598 10 6001 bp 31.24 1.00 0.00
GG745602 8 6890 bp 35.18 1.00 0.00
GG745603 16 10029 bp 40.04 1.00 0.00
GG745604 14 9505 bp 31.79 1.00 0.00
GG745605 11 7400 bp 35.05 1.00 0.00
GG745610 14 12650 bp 33.31 1.00 0.00
GG745611 6 10778 bp 36.31 1.00 0.00
GG745616 4 3619 bp 36.50 1.00 0.00
GG745545 54 40142 bp 35.56 1.00 0.00
GG745547 62 49495 bp 33.59 1.00 0.00
GG745549 7 9368 bp 34.36 1.00 0.00
GG745550 77 62012 bp 33.81 1.00 0.00
GG745551 56 47474 bp 34.53 1.00 0.00
GG745554 43 34925 bp 36.93 1.00 0.00
Displaying items 1-50 of 73 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.