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Candidatus_Parvarchaeum_acidophilus_ARMAN-5_baker2010

amd_refseq_Candidatus_Parvarchaeum_acidophilus_35_1
In projects: amd_refseq  |  AMD_2019  |  alphabet_plasma  |  archaea_ggkbase

Consensus taxonomy: Candidatus Parvarchaeum acidophilus  →  Candidatus Parvarchaeum  →  Parvarchaeota  →  Archaea

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 67.59 Kbp Bin length: 920.27 Kbp GC content: 34.89 %
Contigs count: 73 Features count: 1086 rRNAs count: 0 tRNAs count: 39

Genome completeness

near complete RP 31 / 55 BSCG 16 / 51 MC: 2 ASCG 34 / 38 MC: 5

Description

Candidatus Parvarchaeum acidophilus ARMAN-5 genomic scaffold Scf_ARM5contig_4776, whole genome shotgun sequence

Displaying items 1-50 of 73 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
GG745561 1 1112 bp 32.73 1.00 0.00
GG745560 2 1319 bp 36.39 1.00 0.00
GG745562 3 1385 bp 35.74 1.00 0.00
GG745572 2 1570 bp 37.64 1.00 0.00
GG745564 3 1621 bp 38.19 1.00 0.00
GG745566 3 1715 bp 30.55 1.00 0.00
GG745563 1 1847 bp 35.19 1.00 0.00
GG745571 2 1913 bp 36.28 1.00 0.00
GG745565 2 1941 bp 35.34 1.00 0.00
GG745568 3 1998 bp 32.28 1.00 0.00
GG745573 5 2360 bp 34.66 1.00 0.00
GG745577 4 2522 bp 36.32 1.00 0.00
GG745570 3 2593 bp 36.37 1.00 0.00
GG745567 4 2633 bp 31.83 1.00 0.00
GG745580 2 2686 bp 33.99 1.00 0.00
GG745579 8 3055 bp 32.41 1.00 0.00
GG745569 3 3238 bp 34.06 1.00 0.00
GG745576 2 3407 bp 31.88 1.00 0.00
GG745616 4 3619 bp 36.50 1.00 0.00
GG745581 6 4233 bp 32.13 1.00 0.00
GG745575 4 4520 bp 33.98 1.00 0.00
GG745585 5 4617 bp 32.73 1.00 0.00
GG745578 5 4626 bp 31.43 1.00 0.00
GG745601 6 4659 bp 31.14 1.00 0.00
GG745588 8 4708 bp 34.90 1.00 0.00
GG745587 4 4813 bp 33.89 1.00 0.00
GG745574 8 4832 bp 34.09 1.00 0.00
GG745595 6 5178 bp 33.57 1.00 0.00
GG745584 6 5284 bp 33.02 1.00 0.00
GG745589 8 5464 bp 33.29 1.00 0.00
GG745590 1 5602 bp 39.63 1.00 0.00
GG745582 5 5869 bp 37.83 1.00 0.00
GG745591 6 5988 bp 35.77 1.00 0.00
GG745598 10 6001 bp 31.24 1.00 0.00
GG745596 7 6143 bp 36.14 1.00 0.00
GG745600 7 6163 bp 35.19 1.00 0.00
GG745599 8 6188 bp 34.23 1.00 0.00
GG745586 10 6238 bp 34.26 1.00 0.00
GG745583 11 6501 bp 33.39 1.00 0.00
GG745593 10 6589 bp 33.53 1.00 0.00
GG745592 7 6674 bp 35.24 1.00 0.00
GG745602 8 6890 bp 35.18 1.00 0.00
GG745597 7 7079 bp 31.74 1.00 0.00
GG745594 5 7269 bp 36.25 1.00 0.00
GG745605 11 7400 bp 35.05 1.00 0.00
GG745609 7 8134 bp 34.98 1.00 0.00
GG745608 11 8158 bp 35.71 1.00 0.00
GG745606 6 8655 bp 37.20 1.00 0.00
GG745607 13 8682 bp 35.01 1.00 0.00
GG745549 7 9368 bp 34.36 1.00 0.00
Displaying items 1-50 of 73 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.