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anamox1_curated_scaffold_2815

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2815_1
unknown

Not on your lists

comp(1..114)
DNA (114bp) protein (38aa)

This feature has no annotations

anamox1_curated_scaffold_2815_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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390..1709
DNA (1320bp) protein (440aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000361B61A
Oxidoreductase domain protein {ECO:0000313|EMBL:EEF57117.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NADH-dependent dyhydrogenase
anamox1_curated_scaffold_2815_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(1837..2685)
DNA (849bp) protein (283aa)
beta-lactamase domain-containing protein; K06167 PhnP protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
beta-lactamase-like protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
anamox1_curated_scaffold_2815_4
Brassica oleracea, Brassica, Brassicales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(2694..5858)
DNA (3165bp) protein (1055aa)
GG22683 Tax=Drosophila erecta RepID=B3NSK6_DROER
Uncharacterized protein {ECO:0000313|EnsemblPlants:Bo3g165530.1}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.;" source="Brassica oleracea var. oleracea.;"
hypothetical protein
anamox1_curated_scaffold_2815_5
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6027..7685)
DNA (1659bp) protein (553aa)
Uncharacterized protein Tax=Pelosinus fermentans RepID=I8RFT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EIW18413.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
protein of unknown function UPF0118
anamox1_curated_scaffold_2815_6
RBG_13_Spirochaetes_51_14_curated, Spirochaetes, Bacteria

Not on your lists

comp(7752..9446)
DNA (1695bp) protein (565aa)
PAS/PAC sensor hybrid histidine kinase Tax=Geobacter sp. (strain M18) RepID=E8WT91_GEOS8
PAS/PAC sensor hybrid histidine kinase
Tax=RBG_13_Spirochaetes_51_14_curated
anamox1_curated_scaffold_2815_7
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9618..10904)
DNA (1287bp) protein (429aa)
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase (EC:2.4.2.-)
Monofunctional biosynthetic peptidoglycan transglycosylase Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YHG9_THEYD
Tax=RBG_13_Deltaproteobacteria_43_22_curated
anamox1_curated_scaffold_2815_8
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11130..12578
DNA (1449bp) protein (483aa)
Uncharacterized protein Tax=Thiorhodovibrio sp. 970 RepID=H8YXC5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIC23101.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
hypothetical protein
anamox1_curated_scaffold_2815_9
unknown

Not on your lists

12607..13065
DNA (459bp) protein (153aa)

This feature has no annotations

anamox1_curated_scaffold_2815_trna_1
unknown

Not on your lists

13112..13184
DNA (73bp)
transferRNA Gly
anamox1_curated_scaffold_2815_10
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13221..14354
DNA (1134bp) protein (378aa)
Queuine tRNA-ribosyltransferase bin=GWB2_Proteobacteria_55_19 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
queuine tRNA-ribosyltransferase
Tax=GWB2_Deltaproteobacteria_55_19_curated
anamox1_curated_scaffold_2815_11
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14345..15610
DNA (1266bp) protein (422aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003652E85
MFS permease {ECO:0000313|EMBL:KFE62430.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
permease of the major facilitator superfamily
anamox1_curated_scaffold_2815_12
unknown

Not on your lists

comp(15656..18202)
DNA (2547bp) protein (849aa)

This feature has no annotations

anamox1_curated_scaffold_2815_13
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(18199..20292)
DNA (2094bp) protein (698aa)
Uncharacterized protein Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82RR9_STRAW
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
anamox1_curated_scaffold_2815_14
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20307..21791)
DNA (1485bp) protein (495aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000255|HAMAP-Rule:MF_01865}; Short=S12 MTTase {ECO:0000255|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000255|HAMAP-Rule:MF_01865};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000255|HAMAP-Rule:MF_01865}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
Ribosomal protein S12 methylthiotransferase RimO Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=RIMO_SYMTH
2-methylthioadenine synthetase
anamox1_curated_scaffold_2815_15
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(21791..22423)
DNA (633bp) protein (211aa)
Putative uncharacterized protein Tax=Alistipes indistinctus YIT 12060 RepID=G5H7L6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
Displaying 16 items

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