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anamox1_curated_scaffold_1488

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1488_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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74..1444
DNA (1371bp) protein (457aa)
rhlE; ATP-dependent RNA helicase RhlE (EC:3.6.4.13)
ATP-dependent RNA helicase RhlE {ECO:0000313|EMBL:BAL94700.1}; EC=3.6.4.13 {ECO:0000313|EMBL:BAL94700.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
ATP-dependent RNA helicase RhlE Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNW3_RUBGI
anamox1_curated_scaffold_1488_2
unknown

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1474..1677
DNA (204bp) protein (68aa)

This feature has no annotations

anamox1_curated_scaffold_1488_3
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

1763..1969
DNA (207bp) protein (69aa)
PIN domain nucleic acid-binding protein Tax=Moorea producens 3L RepID=F4XZM6_9CYAN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
anamox1_curated_scaffold_1488_4
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1966..2250
DNA (285bp) protein (95aa)
CRISPR-associated endonuclease Cas1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HLZ1_RUBGI
cas1; CRISPR-associated protein, Cas1 family
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1488_5
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2201..2572
DNA (372bp) protein (124aa)
CRISPR-associated endonuclease Cas1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HLZ1_RUBGI
cas1; CRISPR-associated protein, Cas1 family
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1488_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2792..4000)
DNA (1209bp) protein (403aa)
hypothetical protein; K02004 putative ABC transport system permease protein bin=THIO_HI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox1_curated_scaffold_1488_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4000..4776)
DNA (777bp) protein (259aa)
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein bin=THIO_HI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC transporter-like protein
ABC transporter-like protein {ECO:0000313|EMBL:AFU47164.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
anamox1_curated_scaffold_1488_8
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4773..6128)
DNA (1356bp) protein (452aa)
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein bin=THIO_HI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
RND family efflux transporter MFP subunit
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
anamox1_curated_scaffold_1488_9
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6125..7597)
DNA (1473bp) protein (491aa)
NodT family RND efflux system, outer membrane lipoprotein bin=THIO_HI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
RND transporter {ECO:0000313|EMBL:KJA09428.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
NodT family RND efflux system, outer membrane lipoprotein
anamox1_curated_scaffold_1488_10
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7794..8150)
DNA (357bp) protein (119aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
fkpA; peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
peptidyl-prolyl cis-trans isomerase Tax=Cupriavidus sp. WS RepID=UPI00038070B1
anamox1_curated_scaffold_1488_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8230..9126)
DNA (897bp) protein (299aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
gluQ; glutamyl-Q tRNA(Asp) synthetase GluQ (EC:6.1.1.17)
Glutamyl-Q tRNA(Asp) synthetase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN42_9BURK
anamox1_curated_scaffold_1488_12
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9123..10112)
DNA (990bp) protein (330aa)
LysR family transcriptional regulator Tax=Ideonella sp. B508-1 RepID=UPI00034824B8
Transcriptional regulator {ECO:0000313|EMBL:EHR71899.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
LysR family transcriptional regulator
anamox1_curated_scaffold_1488_13
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10245..10967
DNA (723bp) protein (241aa)
Putative pirin-like protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN44_9BURK
Putative pirin-like protein {ECO:0000313|EMBL:EGJ09762.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative quercetin 2,3-dioxygenase
anamox1_curated_scaffold_1488_14
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10999..12186)
DNA (1188bp) protein (396aa)
Putative transport protein Tax=Bordetella bronchiseptica Bbr77 RepID=K4TDX1_BORBO
transporter
Putative transport protein {ECO:0000313|EMBL:CCJ50661.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain Bpp5).;"
anamox1_curated_scaffold_1488_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12212..12595)
DNA (384bp) protein (128aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI0003714732
Pyridoxamine 5''-phosphate oxidase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
anamox1_curated_scaffold_1488_16
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12717..13850)
DNA (1134bp) protein (378aa)
Rieske (2Fe-2S) domain-containing protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKC0_9BURK
putative dioxygenase (alpha subunit), oxidoreductase protein
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:EGJ08788.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1488_17
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14063..14296
DNA (234bp) protein (78aa)
xseB; exodeoxyribonuclease 7 small subunit XseB (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Exodeoxyribonuclease 7 small subunit Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPS1_RUBGI
anamox1_curated_scaffold_1488_18
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14293..15198
DNA (906bp) protein (302aa)
geranyltranstransferase (EC:2.5.1.10)
Geranylgeranyl pyrophosphate synthase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WT74_9BURK
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:EHR73610.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_1488_19
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15200..17092
DNA (1893bp) protein (631aa)
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPS3_RUBGI
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1488_20
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17172..17963
DNA (792bp) protein (264aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
GTP cyclohydrolase FolE2 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPS4_RUBGI
hypothetical protein
anamox1_curated_scaffold_1488_21
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18129..19961
DNA (1833bp) protein (611aa)
HsnT Tax=Rhizobium leguminosarum bv. trifolii RepID=B5LX94_RHILT
Acyltransferase 3 {ECO:0000313|EMBL:CDX53177.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
acyltransferase 3 protein
Displaying 21 items

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