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anamox1_curated_scaffold_958

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_958_1
RLO_Planctomycetes_39_13, Planctomycetes, Bacteria

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1..1197
DNA (1197bp) protein (399aa)
Similar to lipopolysaccharide core biosynthesis protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2V6_9BACT
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
anamox1_curated_scaffold_958_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1225..2934)
DNA (1710bp) protein (570aa)
Ribulokinase {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|SAAS:SAAS00183333}; EC=2.7.1.16 {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|SAAS:SAAS00183333};; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
Ribulokinase Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MES1_RHOM4
L-ribulokinase
anamox1_curated_scaffold_958_3
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

2970..4331
DNA (1362bp) protein (454aa)
hypothetical protein Tax=Bacillus endophyticus RepID=UPI0003184B89
Glycosyl Hydrolase Family 88 {ECO:0000313|EMBL:EIP98095.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
glycosyl hydrolase
anamox1_curated_scaffold_958_4
RHI_Planctomycetes_52_36, Planctomycetes, Bacteria

Not on your lists

4328..5224
DNA (897bp) protein (299aa)
Uncharacterized protein bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
shikimate 5-dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated
anamox1_curated_scaffold_958_5
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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5217..6317
DNA (1101bp) protein (367aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_52_8 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
anamox1_curated_scaffold_958_6
GWC2_OP9X_49_35_curated, OP9X, Bacteria

Not on your lists

6402..7433
DNA (1032bp) protein (344aa)
bhy:BHWA1_00145 gmd; GDP-D-mannose dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
Tax=GWC2_OP9X_49_35_curated
anamox1_curated_scaffold_958_7
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

7480..8682
DNA (1203bp) protein (401aa)
DegT/DnrJ/EryC1/StrS aminotransferase bin=GWA2_Elusimicrobia_66_18 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
DegT/DnrJ/EryC1/StrS aminotransferase
Tax=GWC2_Elusimicrobia_65_9_curated
anamox1_curated_scaffold_958_8
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

8806..9753
DNA (948bp) protein (316aa)
Glycosyl transferase, family 2 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V155_ROSS1
glycosyl transferase family protein
Tax=RBG_16_Chloroflexi_52_11_curated
anamox1_curated_scaffold_958_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9746..10672
DNA (927bp) protein (309aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035F311A
Uncharacterized protein {ECO:0000313|EMBL:ETX01856.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
family 2 glycosyl transferase
anamox1_curated_scaffold_958_10
unknown

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10763..11269
DNA (507bp) protein (169aa)

This feature has no annotations

anamox1_curated_scaffold_958_11
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11350..13488)
DNA (2139bp) protein (713aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000367B800
Hypothetical protein
Tax=RBG_16_Planctomycetes_64_10_curated
anamox1_curated_scaffold_958_12
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(13485..15923)
DNA (2439bp) protein (813aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease Tax=Caldithrix abyssi DSM 13497 RepID=H1XTB7_9BACT
anamox1_curated_scaffold_958_13

Not on your lists

comp(16000..16461)
DNA (462bp) protein (154aa)
Heat shock protein Tax=planctomycete KSU-1 RepID=I3IJU4_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKM19889.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
small heat shock protein
anamox1_curated_scaffold_958_14

Not on your lists

16600..17685
DNA (1086bp) protein (362aa)
Marine sediment metagenome DNA, contig: S01H1_L03399 {ECO:0000313|EMBL:GAF70016.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PfkB domain protein bin=GWF2_Lentisphaerae_49_21 species=uncultured bacterium 293 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
carbohydrate kinase, PfkB family
anamox1_curated_scaffold_958_15
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17769..18872)
DNA (1104bp) protein (368aa)
Riboflavin biosynthesis protein RibD Tax=Clostridium sp. CAG:167 RepID=R5VIF8_9CLOT
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
riboflavin biosynthesis protein
anamox1_curated_scaffold_958_16
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18869..19468)
DNA (600bp) protein (200aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
Non-canonical purine NTP pyrophosphatase Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CIR8_SYNLT
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
anamox1_curated_scaffold_958_17
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19513..20946)
DNA (1434bp) protein (478aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
NADH-quinone oxidoreductase subunit N Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K782_NITWC
NADH-quinone oxidoreductase subunit N
anamox1_curated_scaffold_958_18
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20950..22458)
DNA (1509bp) protein (503aa)
NADH dehydrogenase subunit M (EC:1.6.5.3)
NADH dehydrogenase subunit M Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCS9_DESTA
Tax=RBG_13_Deltaproteobacteria_47_9_curated
anamox1_curated_scaffold_958_19
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22455..24356)
DNA (1902bp) protein (634aa)
NADH:ubiquinone oxidoreductase subunit L Tax=Pontibacter roseus RepID=UPI0003699A23
NADH-quinone oxidoreductase subunit L
NADH-quinone oxidoreductase subunit L {ECO:0000313|EMBL:AKD03959.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
anamox1_curated_scaffold_958_20
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24358..24669)
DNA (312bp) protein (104aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;"
NADH:ubiquinone oxidoreductase subunit K Tax=Nevskia ramosa RepID=UPI0003B4C7A1
nuoK; NADH dehydrogenase subunit K
anamox1_curated_scaffold_958_21
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24666..25187)
DNA (522bp) protein (174aa)
NADH:ubiquinone oxidoreductase subunit 6 (chain J) (EC:1.6.5.3)
NADH:ubiquinone oxidoreductase subunit 6 (Chain J) {ECO:0000313|EMBL:AFM27373.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AFM27373.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
NADH:ubiquinone oxidoreductase subunit 6 (Chain J) Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCT2_DESTA
anamox1_curated_scaffold_958_22
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(25198..25713)
DNA (516bp) protein (172aa)
NADH-quinone oxidoreductase subunit I; K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] bin=CNBR_ACIDO species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NADH dehydrogenase subunit I (EC:1.6.5.3)
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
anamox1_curated_scaffold_958_23
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(25726..26706)
DNA (981bp) protein (327aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
NADH-quinone oxidoreductase subunit H Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q754_9BACT
NADH:ubiquinone oxidoreductase subunit 1 (chain H)
anamox1_curated_scaffold_958_24
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26703..27851)
DNA (1149bp) protein (383aa)
NADH-quinone oxidoreductase, chain G Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C512_NITHN
NADH-quinone oxidoreductase subunit G
NADH-quinone oxidoreductase, chain G {ECO:0000313|EMBL:ADE15235.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
Displaying 24 items

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