ggKbase home page

anamox1_curated_scaffold_64

Search features with annotation key words

Displaying items 1-30 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_64_1
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(3..2066)
DNA (2064bp) protein (688aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI0003732CA5
Uncharacterized protein {ECO:0000313|EMBL:KDA53178.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
cell surface protein
anamox1_curated_scaffold_64_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2126..4750)
DNA (2625bp) protein (875aa)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2H9_9BACT
IPTL-CTERM sorting domain protein {ECO:0000313|EMBL:KFJ09712.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
anamox1_curated_scaffold_64_3
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(5042..5986)
DNA (945bp) protein (315aa)
Putative uncharacterized protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTZ6_HALO1 bin=16ft_combo_ws3_JS1 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
anamox1_curated_scaffold_64_4
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6029..7729)
DNA (1701bp) protein (567aa)
Lytic transglycosylase catalytic Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FEU9_DESAA
lytic transglycosylase
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ACL03626.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
anamox1_curated_scaffold_64_5
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7732..8493)
DNA (762bp) protein (254aa)
Putative enoyl-CoA hydratase Tax=Rhodanobacter denitrificans RepID=I4WPQ8_9GAMM
Enoyl-CoA hydratase {ECO:0000313|EMBL:KGI77920.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
enoyl-CoA hydratase/carnithine racemase
anamox1_curated_scaffold_64_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8531..9478)
DNA (948bp) protein (316aa)
Integral membrane protein TerC Tax=Oscillochloris trichoides DG-6 RepID=E1IHS0_9CHLR
integral membrane protein TerC
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
anamox1_curated_scaffold_64_7
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9688..11079)
DNA (1392bp) protein (464aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IEQ8_ANADE
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
anamox1_curated_scaffold_64_8
BJP_IG2069_Synergistales_47_25, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(11210..12019)
DNA (810bp) protein (270aa)
short-chain dehydrogenase Tax=Synergistetes bacterium JGI 0000079-D21 RepID=UPI0003B45EF6
short-chain dehydrogenase/reductase SDR
Tax=BJP_IG2069_Synergistales_47_25
anamox1_curated_scaffold_64_9
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12024..12818)
DNA (795bp) protein (265aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FSZ5_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD42070.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
anamox1_curated_scaffold_64_10
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(12833..14110)
DNA (1278bp) protein (426aa)
Putative uncharacterized protein Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EDI2_AMICL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE56614.1}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
anamox1_curated_scaffold_64_11
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14149..15126)
DNA (978bp) protein (326aa)
Uncharacterized protein Tax=Marinobacter sp. C1S70 RepID=U7NI42_9ALTE
ADP-ribosylglycohydrolase
ADP-ribosylglycohydrolase {ECO:0000313|EMBL:AGA91405.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
anamox1_curated_scaffold_64_trna_5
unknown

Not on your lists

comp(15312..15383)
DNA (72bp)
transferRNA Asn
anamox1_curated_scaffold_64_12
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(15463..17181)
DNA (1719bp) protein (573aa)
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
sigma 38, RpoS; K03086 RNA polymerase primary sigma factor bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sigma 38, RpoS
anamox1_curated_scaffold_64_13
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17246..19033)
DNA (1788bp) protein (596aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
DNA primase, catalytic core Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QE37_9FIRM
DNA primase
anamox1_curated_scaffold_64_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19042..21414)
DNA (2373bp) protein (791aa)
Endonuclease MutS2 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0D3_DEHLB
MutS2 family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
anamox1_curated_scaffold_64_15
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(21538..21747)
DNA (210bp) protein (70aa)
30S ribosomal protein S21 Tax=Holophaga foetida DSM 6591 RepID=H1NYY3_9BACT
SSU ribosomal protein S21P
Tax=RBG_13_Acidobacteria_68_16_curated
anamox1_curated_scaffold_64_16
unknown

Not on your lists

comp(21878..22624)
DNA (747bp) protein (249aa)

This feature has no annotations

anamox1_curated_scaffold_64_17
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

22837..24642
DNA (1806bp) protein (602aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIK1_CHLTF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP11899.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
anamox1_curated_scaffold_64_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

24654..26882
DNA (2229bp) protein (743aa)
Transglycosylase SLT domain-containing protein bin=GWC2_Methylomirabilis_70_24 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
lytic transglycosylase catalytic subunit
Tax=GWA2_Rokubacteria_70_23_curated
anamox1_curated_scaffold_64_trna_1
unknown

Not on your lists

26956..27028
DNA (73bp)
transferRNA Met
anamox1_curated_scaffold_64_19
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

27198..27935
DNA (738bp) protein (246aa)
Putative uncharacterized protein Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H0K2_DENA2
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
anamox1_curated_scaffold_64_20
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27932..28378
DNA (447bp) protein (149aa)
Ribonuclease H Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2INW4_ANADE
ribonuclease H
Tax=RBG_16_Anaeromyxobacter_69_14_curated
anamox1_curated_scaffold_64_21
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

28383..29105
DNA (723bp) protein (241aa)
Pyridoxal phosphate enzyme, YggS family Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEU6_CHLTF
pyridoxal phosphate enzyme, YggS family
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:AEP12079.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
anamox1_curated_scaffold_64_22
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

29189..29488
DNA (300bp) protein (100aa)
Putative uncharacterized protein Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AQM5_9BACT
hypothetical protein
Integral membrane protein YggT {ECO:0000313|EMBL:KGA94427.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum.;"
anamox1_curated_scaffold_64_23
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29501..30004
DNA (504bp) protein (168aa)
DivIVA family protein Tax=uncultured bacterium RepID=K2BJ13_9BACT
DivIVA family protein
Tax=GWC2_Deltaproteobacteria_42_11_curated
anamox1_curated_scaffold_64_24
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

30025..31293
DNA (1269bp) protein (423aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Imidazolonepropionase Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8FL88_PAEMK
hutI; protein HutI
anamox1_curated_scaffold_64_25
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

31305..31715
DNA (411bp) protein (137aa)
Putative uncharacterized protein Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLQ4_ROSCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU58450.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
anamox1_curated_scaffold_64_26
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31718..32524
DNA (807bp) protein (269aa)
Endonuclease/exonuclease/phosphatase Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KLV7_SIMAS
endonuclease/exonuclease/phosphatase
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
anamox1_curated_scaffold_64_27
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(32537..33154)
DNA (618bp) protein (206aa)
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RBG_16_Aminicenantes_63_16_curated
anamox1_curated_scaffold_64_28
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(33180..33470)
DNA (291bp) protein (97aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036608E4
hypothetical protein
Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
Displaying items 1-30 of 176 in total

View Taxonomy