name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
anamox1_curated_scaffold_547_1
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2..433)
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RNA polymerase sigma factor Tax=Methylocystis sp. (strain SC2) RepID=I4EB06_METSZ
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
ECF-family RNA polymerase sigma factor
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anamox1_curated_scaffold_547_2
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(581..1282)
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Uncharacterized protein Tax=Methylocystis sp. (strain SC2) RepID=I4EB07_METSZ
Uncharacterized protein {ECO:0000313|EMBL:CCD32163.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
hypothetical protein
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|
anamox1_curated_scaffold_547_3
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1669..2103
|
Putative uncharacterized protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7L4_LEPCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB36162.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
|
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anamox1_curated_scaffold_547_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2170..2781
|
thrH; phosphoserine--homoserine phosphotransferase ThrH (EC:3.1.3.3)
Phosphoserine--homoserine phosphotransferase ThrH {ECO:0000313|EMBL:BAL96634.1}; EC=3.1.3.3 {ECO:0000313|EMBL:BAL96634.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Phosphoserine--homoserine phosphotransferase ThrH Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUE7_RUBGI
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anamox1_curated_scaffold_547_trna_6
unknown
|
Not on your lists |
comp(3028..3117)
|
transferRNA Ser
|
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anamox1_curated_scaffold_547_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3172..4449)
|
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
lysC; aspartokinase LysC (EC:2.7.2.4)
Aspartokinase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQX7_9BURK
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anamox1_curated_scaffold_547_6
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4566..5873)
|
tilS; tRNA(Ile)-lysidine synthase TilS (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
tRNA(Ile)-lysidine synthase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU13_RUBGI
|
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anamox1_curated_scaffold_547_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5906..6877)
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Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit AccA (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQX5_9BURK
|
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anamox1_curated_scaffold_547_8
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6877..7590)
|
alkA; DNA-3-methyladenine glycosylase II AlkA (EC:3.2.2.21)
DNA-3-methyladenine glycosylase II AlkA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU15_RUBGI
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
|
|
anamox1_curated_scaffold_547_9
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7611..9014)
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Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQX3_9BURK
|
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anamox1_curated_scaffold_547_10
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9161..9736
|
ppiA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) PpiA (EC:5.2.1.8)
peptidyl-prolyl cis-trans isomerase Tax=Ideonella sp. B508-1 RepID=UPI00034691B6
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
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anamox1_curated_scaffold_547_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9739..10239
|
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ppiB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) PpiB (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQX0_9BURK
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anamox1_curated_scaffold_547_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10280..11113
|
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575};; UDP-2,3-diacylglucosamine diphosphatase {ECO:0000256|HAMAP-Rule:MF_00575}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
lpxH; UDP-2,3-diacylglucosamine hydrolase LpxH (EC:3.6.1.-)
UDP-2,3-diacylglucosamine hydrolase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQW9_9BURK
|
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anamox1_curated_scaffold_547_13
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11122..11898
|
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU21_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96508.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
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anamox1_curated_scaffold_547_14
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11978..12226
|
Uncharacterized protein Tax=Thauera phenylacetica B4P RepID=N6Z1B8_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:CDS50315.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
|
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anamox1_curated_scaffold_547_15
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12227..12640
|
PilT domain-containing protein Tax=Thauera phenylacetica B4P RepID=N6ZZU7_9RHOO
PIN domain protein {ECO:0000313|EMBL:KIN91527.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
PilT domain-containing protein
|
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anamox1_curated_scaffold_547_16
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12764..15073)
|
clpA; ATP-dependent Clp protease (EC:3.4.21.92)
ATP-dependent Clp protease, ATP-binding subunit clpA Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQW7_9BURK
ATP-dependent Clp protease, ATP-binding subunit clpA {ECO:0000313|EMBL:EGJ10735.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
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anamox1_curated_scaffold_547_17
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15070..15426)
|
ATP-dependent Clp protease adapter protein ClpS Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU23_RUBGI
clpS; ATP-dependent Clp protease adapter protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
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anamox1_curated_scaffold_547_18
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15763..15996
|
Cold shock protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU24_RUBGI
csp; cold shock protein
Cold shock protein {ECO:0000313|EMBL:BAL96511.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
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anamox1_curated_scaffold_547_19
unknown
|
Not on your lists |
comp(16079..16882)
|
von Willebrand factor type A
|
|
anamox1_curated_scaffold_547_20
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17246..20020
|
TPR repeat protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL26_RUBGI
TPR repeat protein
TPR repeat protein {ECO:0000313|EMBL:BAL93713.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
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anamox1_curated_scaffold_547_21
unknown
|
Not on your lists |
comp(20102..20389)
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This feature has no annotations |
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anamox1_curated_scaffold_547_22
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20422..21318)
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Tyrosine recombinase XerD Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRZ3_9BURK
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
xerD; tyrosine recombinase XerD
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anamox1_curated_scaffold_547_23
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21405..22316
|
transporter Tax=Ideonella sp. B508-1 RepID=UPI0003B67FB5
Auxin efflux carrier {ECO:0000313|EMBL:EGJ11108.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
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anamox1_curated_scaffold_547_24
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22402..23484)
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Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Epoxyqueuosine reductase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP85_RUBGI
putative 4Fe-4S cluster-binding ferredoxin protein
|
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anamox1_curated_scaffold_547_25
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23512..23985
|
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRY8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11106.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative ATPase
|
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anamox1_curated_scaffold_547_26
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23982..25325
|
amiC; N-acetylmuramoyl-L-alanine amidase AmiC (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase AmiC {ECO:0000313|EMBL:BAL94820.1}; EC=3.5.1.28 {ECO:0000313|EMBL:BAL94820.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
N-acetylmuramoyl-L-alanine amidase AmiC Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP83_RUBGI
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anamox1_curated_scaffold_547_27
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25273..28584)
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Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
dnaE; error-prone DNA polymerase DnaE (EC:2.7.7.7)
Error-prone DNA polymerase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNR6_RUBGI
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anamox1_curated_scaffold_547_trna_5
unknown
|
Not on your lists |
comp(28683..28768)
|
transferRNA Leu
|
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anamox1_curated_scaffold_547_trna_4
unknown
|
Not on your lists |
comp(28879..28949)
|
transferRNA Cys
|