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anamox1_curated_scaffold_1343

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1343_1
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(564..770)
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RS43_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP48870.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
anamox1_curated_scaffold_1343_2
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1172..1405)
DNA (234bp) protein (78aa)
hypothetical protein Tax=Methyloversatilis sp. NVD RepID=UPI0003709FFD
Uncharacterized protein {ECO:0000313|EMBL:EXI68891.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
anamox1_curated_scaffold_1343_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1541..2146)
DNA (606bp) protein (202aa)
Ranscriptional regulator, PadR family Tax=Sorangium cellulosum (strain So ce56) RepID=A9GCC6_SORC5
transcriptional regulator
Ranscriptional regulator, PadR family {ECO:0000313|EMBL:CAN96169.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
anamox1_curated_scaffold_1343_4
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2259..3047
DNA (789bp) protein (263aa)
Putative oxidoreductase (EC:1.-.-.-)
short-chain dehydrogenase, oxidoreductase Tax=Acidovorax radicis RepID=UPI0002376D7A
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:EWM67698.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
anamox1_curated_scaffold_1343_5
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3068..3214
DNA (147bp) protein (49aa)
Putative uncharacterized protein Tax=Hylemonella gracilis ATCC 19624 RepID=F3KQB6_9BURK
putative uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:CDG81021.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
anamox1_curated_scaffold_1343_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3411..4259)
DNA (849bp) protein (283aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Formyltetrahydrofolate deformylase Tax=Alicycliphilus denitrificans RepID=E8TWD3_ALIDB
formyltetrahydrofolate deformylase
anamox1_curated_scaffold_1343_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4321..5463)
DNA (1143bp) protein (381aa)
FAD-binding oxidoreductase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSG2_9BURK
FAD-binding oxidoreductase {ECO:0000313|EMBL:EGJ11280.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative oxidoreductase
anamox1_curated_scaffold_1343_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5573..7039
DNA (1467bp) protein (489aa)
cytochrome oxidase subunit I Tax=Dyella japonica RepID=UPI0002E4C53F
cbb3-type cytochrome c oxidase subunit I
Cbb3-type cytochrome c oxidase subunit I {ECO:0000313|EMBL:AIF48072.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
anamox1_curated_scaffold_1343_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7052..7714
DNA (663bp) protein (221aa)
Cbb3-type cytochrome c oxidase subunit II Tax=Rhodanobacter sp. 115 RepID=I4WWE4_9GAMM
Cbb3-type cytochrome c oxidase subunit II {ECO:0000313|EMBL:EIM03786.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cytochrome c oxidase, cbb3-type, subunit II
anamox1_curated_scaffold_1343_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7711..7899
DNA (189bp) protein (63aa)
Cytochrome c oxidase subunit Tax=Rhodanobacter fulvus Jip2 RepID=I4W129_9GAMM
Cytochrome c oxidase subunit {ECO:0000313|EMBL:EIL93170.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Cbb3-type cytochrome oxidase component FixQ
anamox1_curated_scaffold_1343_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7896..8810
DNA (915bp) protein (305aa)
Cbb3-type cytochrome c oxidase subunit Tax=Rhodanobacter denitrificans RepID=I4WX95_9GAMM
cytochrome c oxidase, cbb3-type, subunit III
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox1_curated_scaffold_1343_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8815..9060
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Rhodanobacter spathiphylli B39 RepID=I4W721_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95262.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
anamox1_curated_scaffold_1343_13
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9057..11507
DNA (2451bp) protein (817aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037A11AA
Uncharacterized protein {ECO:0000313|EMBL:KGI78378.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
heavy metal translocating P-type ATPase
anamox1_curated_scaffold_1343_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11504..11716
DNA (213bp) protein (71aa)
Cytochrome oxidase maturation protein, cbb3-type Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WK13_9GAMM
cytochrome oxidase maturation protein, cbb3-type
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
anamox1_curated_scaffold_1343_15
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11713..12438
DNA (726bp) protein (242aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036807B5
Uncharacterized protein {ECO:0000313|EMBL:KGI77863.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cytochrome biogenesis protein
anamox1_curated_scaffold_1343_16
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12467..13549)
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
serC; phosphoserine aminotransferase SerC (EC:2.6.1.52)
Phosphoserine aminotransferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQN9_9BURK
anamox1_curated_scaffold_1343_17
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13684..14127
DNA (444bp) protein (148aa)
UspA domain-containing protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQN8_9BURK
UspA domain-containing protein {ECO:0000313|EMBL:EGJ10656.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_1343_18
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14213..14896
DNA (684bp) protein (228aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNG8_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94555.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1343_19
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14915..16363
DNA (1449bp) protein (483aa)
sbcB; exonuclease I (EC:3.1.11.1)
Exonuclease I Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WI40_9BURK
Exonuclease I {ECO:0000313|EMBL:EHR70914.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_1343_20
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16433..16921
DNA (489bp) protein (163aa)
endoribonuclease L-PSP Tax=Burkholderia sp. JPY251 RepID=UPI000381F536
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ADG15675.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
anamox1_curated_scaffold_1343_21
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17035..18321
DNA (1287bp) protein (429aa)
Uracil-xanthine permease Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVM9_9BURK
Uracil-xanthine permease {ECO:0000313|EMBL:EGJ12397.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
xanthine/uracil permease family protein
anamox1_curated_scaffold_1343_22
uncultured proteobacterium, Proteobacteria, Bacteria

Not on your lists

comp(18354..19289)
DNA (936bp) protein (312aa)
S-adenosylmethionine uptake transporter Tax=uncultured proteobacterium RepID=R4MP45_9PROT
S-adenosylmethionine uptake transporter {ECO:0000313|EMBL:AGL33524.1}; species="Bacteria; Proteobacteria; environmental samples.;" source="uncultured proteobacterium.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
anamox1_curated_scaffold_1343_23
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19339..19533
DNA (195bp) protein (65aa)
hypothetical protein Tax=Comamonas sp. B-9 RepID=UPI000395DEFF
Uncharacterized protein {ECO:0000313|EMBL:EGJ08760.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_1343_24
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19612..22197)
DNA (2586bp) protein (862aa)
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRNR036687}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (EC:4.2.1.3)
Aconitate hydratase 2 Tax=Acidovorax sp. (strain JS42) RepID=A1W9K3_ACISJ
anamox1_curated_scaffold_1343_25
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22311..22622)
DNA (312bp) protein (104aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
DNA-binding protein Tax=Ideonella sp. B508-1 RepID=UPI00034959B1
hypothetical protein
anamox1_curated_scaffold_1343_26
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22619..22831)
DNA (213bp) protein (71aa)
AbrB family transcriptional regulator Tax=Xanthomonas RepID=UPI0002630470
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP51502.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain B100).;"
anamox1_curated_scaffold_1343_27
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23032..23631)
DNA (600bp) protein (200aa)
hypothetical protein Tax=Ideonella sp. B508-1 RepID=UPI00034A36D8
putative signal peptide protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
anamox1_curated_scaffold_1343_28
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23709..24719)
DNA (1011bp) protein (337aa)
Putative lyase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNH7_RUBGI
putative lyase
Putative lyase {ECO:0000313|EMBL:BAL94564.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1343_29
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24739..25725)
DNA (987bp) protein (329aa)
malate dehydrogenase Tax=Caldimonas manganoxidans RepID=UPI0003657F7C
malate/lactate dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1343_30
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25871..26647
DNA (777bp) protein (259aa)
Transcriptional regulator, GntR family Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNH9_RUBGI
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:BAL94566.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Displaying items 1-30 of 36 in total

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