ggKbase home page

anamox1_curated_scaffold_338

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_338_1
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(204..539)
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S9Q1_PROA2
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
anamox1_curated_scaffold_338_2
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(536..1591)
DNA (1056bp) protein (352aa)
RNA-directed DNA polymerase (Reverse transcriptase) Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQ26_ACCPU
Group II intron-encoded protein LtrA {ECO:0000313|EMBL:EXI90138.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
RNA-directed DNA polymerase
anamox1_curated_scaffold_338_3
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(1732..4638)
DNA (2907bp) protein (969aa)
Signal transduction protein Tax=uncultured Chloroflexi bacterium RepID=H5SAK5_9CHLR
signal transduction protein with Nacht domain
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
anamox1_curated_scaffold_338_4
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4770..5678
DNA (909bp) protein (303aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=GWB2_Ignavibacteria_35_6b_curated
anamox1_curated_scaffold_338_5
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5800..6252)
DNA (453bp) protein (151aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase bin=GWC2_Syntrophus__56_31 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=GWC2_Syntrophus_56_31_curated
anamox1_curated_scaffold_338_6
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(6319..9108)
DNA (2790bp) protein (930aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N632_ANATU
hypothetical protein
Tax=RBG_16_Chloroflexi_51_16_curated
anamox1_curated_scaffold_338_7
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(9144..10439)
DNA (1296bp) protein (432aa)
pdp; pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RBG_16_Chloroflexi_51_16_curated
anamox1_curated_scaffold_338_8
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(10583..11266)
DNA (684bp) protein (228aa)
Uracil-DNA glycosylase family protein bin=GWC2_Chloroflexi_49_37 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
uracil-DNA glycosylase
Tax=BJP_IG2157_Anaerolineales_55_23
anamox1_curated_scaffold_338_9
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(11307..12326)
DNA (1020bp) protein (340aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
Tax=CG_Anaero_01
anamox1_curated_scaffold_338_10
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(12953..15145)
DNA (2193bp) protein (731aa)
Putative uncharacterized protein Tax=Oscillochloris trichoides DG-6 RepID=E1IHE0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFO79393.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
hypothetical protein
anamox1_curated_scaffold_338_11
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(15207..15434)
DNA (228bp) protein (76aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000380B094
Protein of unknown function (DUF2905)
Tax=RBG_16_Chloroflexi_51_16_curated
anamox1_curated_scaffold_338_12
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(15538..16557)
DNA (1020bp) protein (340aa)
ruvB; Holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=CG_Anaero_04
anamox1_curated_scaffold_338_13
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(16803..17969)
DNA (1167bp) protein (389aa)
Secretion protein HlyD family protein bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
secretion protein HlyD family protein
Tax=BJP_IG2157_Anaerolineales_55_23
anamox1_curated_scaffold_338_14
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(18070..20502)
DNA (2433bp) protein (811aa)
Putative ABC transporter permease protein bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
protein of unknown function DUF214
Tax=CG_Anaero_04
anamox1_curated_scaffold_338_15
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(20499..21686)
DNA (1188bp) protein (396aa)
Cyclic nucleotide-binding protein bin=GWD2_Chloroflexi_49_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
cyclic nucleotide-binding protein
Tax=GWC2_Chloroflexi_49_37_curated
anamox1_curated_scaffold_338_16
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(21683..22558)
DNA (876bp) protein (292aa)
Phosphonate-transporting ATPase (EC:3.6.3.28)
Cyclic nucleotide-binding protein bin=GWD2_Chloroflexi_49_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=CG_Anaero_03
anamox1_curated_scaffold_338_17
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

22678..23304
DNA (627bp) protein (209aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
anamox1_curated_scaffold_338_18
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(23350..24480)
DNA (1131bp) protein (377aa)
Rod shape-determining protein MreB bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
mreB; rod shape-determining protein MreB
Tax=RBG_16_Chloroflexi_51_16_curated
anamox1_curated_scaffold_338_19
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

24556..25647
DNA (1092bp) protein (364aa)
putative D-alanine--D-alanine ligase (EC:6.3.2.4)
Putative D-alanine--D-alanine ligase bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Tax=RBG_16_Chloroflexi_51_16_curated
anamox1_curated_scaffold_338_20
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

25793..26230
DNA (438bp) protein (146aa)
id=1960706 bin=GWD2_Chloroflexi_49_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Predicted membrane protein
Tax=GWC2_Chloroflexi_49_37_curated
anamox1_curated_scaffold_338_21
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

26238..26705
DNA (468bp) protein (156aa)
Cytochrome b subunit of the bc complex bin=GWB2_Chloroflexi_49_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
cytochrome c family protein
Tax=BJP_IG2157_Anaerolineales_55_23
anamox1_curated_scaffold_338_trna_1
unknown

Not on your lists

26789..26873
DNA (85bp)
transferRNA Ser
anamox1_curated_scaffold_338_22
Dehalococcoides sp. enrichment culture clone WBC-2_Dhc_01, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(27080..28663)
DNA (1584bp) protein (528aa)
DsiB Tax=Dehalococcoides sp. enrichment culture clone WBC-2_Dhc_01 RepID=F8V499_9CHLR
ssrA integrase
DsiB {ECO:0000313|EMBL:AEI59430.1}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides; environmental samples.;" source="Dehalococcoides sp. enrichment culture clone WBC-2_Dhc_01.;"
anamox1_curated_scaffold_338_23
unknown

Not on your lists

comp(28719..28817)
DNA (99bp) protein (33aa)

This feature has no annotations

anamox1_curated_scaffold_338_24
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

29020..29706
DNA (687bp) protein (229aa)
Transcriptional regulator, Crp/Fnr family Tax=uncultured bacterium RepID=K2CTD9_9BACT
putative Crp family transcriptional regulator
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
anamox1_curated_scaffold_338_25
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

29791..30102
DNA (312bp) protein (104aa)
Uncharacterized protein bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
anamox1_curated_scaffold_338_26
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

30107..30637
DNA (531bp) protein (177aa)
Nickel-dependent hydrogenase b-type cytochrome subunit Tax=Osedax symbiont Rs1 RepID=S6GDT1_9GAMM
cytochrome b561
Tax=BJP_IG2157_Anaerolineales_55_23
anamox1_curated_scaffold_338_27
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

30644..31402
DNA (759bp) protein (253aa)
Cytochrome c family protein bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
cytochrome c family protein
Tax=BJP_IG2157_Anaerolineales_55_23
anamox1_curated_scaffold_338_28
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31418..32221
DNA (804bp) protein (268aa)
Hypothetical membrane protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N1X5_ANATU
hypothetical protein
Tax=RBG_16_Gallionellales_56_9_curated
anamox1_curated_scaffold_338_29
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

32258..32686
DNA (429bp) protein (143aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADI3_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH40560.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Displaying items 1-30 of 64 in total

View Taxonomy