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anamox1_curated_scaffold_2349

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2349_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..384)
DNA (384bp) protein (128aa)
Magnesium transporter Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE8_GEMAT
mgtE; magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_2349_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(549..794)
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE7_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39745.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_2349_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

897..1874
DNA (978bp) protein (326aa)
mmsB; 3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:BAH39744.1}; EC=1.1.1.31 {ECO:0000313|EMBL:BAH39744.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
3-hydroxyisobutyrate dehydrogenase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE6_GEMAT
anamox1_curated_scaffold_2349_4
unknown

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comp(1736..2080)
DNA (345bp) protein (115aa)

This feature has no annotations

anamox1_curated_scaffold_2349_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2603..3154
DNA (552bp) protein (184aa)
Putative cysteine desulfurase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE5_GEMAT
putative cysteine desulfurase
Putative cysteine desulfurase {ECO:0000313|EMBL:BAH39743.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_2349_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3155..4429
DNA (1275bp) protein (425aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE4_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39742.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_2349_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4426..4938
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE3_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39741.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_2349_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4940..6013)
DNA (1074bp) protein (358aa)
rnz; ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z {ECO:0000255|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000255|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000255|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000255|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000255|HAMAP-Rule:MF_01818}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Ribonuclease Z Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RNZ_GEMAT
anamox1_curated_scaffold_2349_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6162..6548
DNA (387bp) protein (129aa)
Putative uncharacterized protein Tax=Microcystis aeruginosa (strain NIES-843) RepID=B0JTG3_MICAN
Stress-induced protein, KGG, repeat-containing protein
Stress-induced protein, KGG, repeat-containing protein {ECO:0000313|EMBL:AHG91865.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
anamox1_curated_scaffold_2349_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6644..7639)
DNA (996bp) protein (332aa)
putative threonine dehydratase (EC:4.3.1.19)
Putative threonine dehydratase {ECO:0000313|EMBL:BAH39735.1}; EC=4.3.1.19 {ECO:0000313|EMBL:BAH39735.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Putative threonine dehydratase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAD7_GEMAT
anamox1_curated_scaffold_2349_trna_1
unknown

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7791..7863
DNA (73bp)
transferRNA Ala
anamox1_curated_scaffold_2349_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7953..9827
DNA (1875bp) protein (625aa)
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Glutamine--tRNA ligase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAD4_GEMAT
anamox1_curated_scaffold_2349_trna_2
unknown

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9918..9990
DNA (73bp)
transferRNA Gln
anamox1_curated_scaffold_2349_12
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(10018..10272)
DNA (255bp) protein (85aa)
Helix-turn-helix domain protein Tax=Opitutaceae bacterium TAV5 RepID=H1IMT1_9BACT
XRE family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
anamox1_curated_scaffold_2349_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10754..11626
DNA (873bp) protein (291aa)
Putative methyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A685_GEMAT
arsM; arsenite S-adenosylmethyltransferase
Putative methyltransferase {ECO:0000313|EMBL:BAH37745.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_2349_14
unknown

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comp(12196..12690)
DNA (495bp) protein (165aa)

This feature has no annotations

anamox1_curated_scaffold_2349_15
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13576..14280
DNA (705bp) protein (235aa)
hypothetical protein Tax=Roseomonas sp. B5 RepID=UPI00037AC0F7
CRISPR-associated protein Cas3 {ECO:0000313|EMBL:KAI95305.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
CRISPR-associated helicase, Cas3 family
anamox1_curated_scaffold_2349_16
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14515..16194
DNA (1680bp) protein (560aa)
CRISPR-associated protein, Cse1 family Tax=Rhodospirillum photometricum DSM 122 RepID=H6SKX5_RHOPH
Cse1 family CRISPR-associated protein
CRISPR-associated protein, Cse1 family {ECO:0000313|EMBL:CCG08640.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
anamox1_curated_scaffold_2349_17
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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16191..16826
DNA (636bp) protein (212aa)
CRISPR-associated protein, Cse2 family Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E5V1_GEOLS
CRISPR-associated protein, Cse2 family
CRISPR-associated protein, Cse2 family {ECO:0000313|EMBL:ACD96192.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
anamox1_curated_scaffold_2349_18
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16833..17924
DNA (1092bp) protein (364aa)
hypothetical protein Tax=Roseomonas sp. B5 RepID=UPI0002FB57BE
Cse4 family CRISPR-associated protein
CRISPR-associated protein, Cse4 family {ECO:0000313|EMBL:ACL60256.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
anamox1_curated_scaffold_2349_19
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17921..18679
DNA (759bp) protein (253aa)
CRISPR-associated protein, Cas5e family Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FZI0_ACICJ
CRISPR-associated Cas5 family protein
CRISPR-associated protein, Cas5e family {ECO:0000313|EMBL:ABQ31012.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
anamox1_curated_scaffold_2349_20
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18676..19431
DNA (756bp) protein (252aa)
CRISPR-associated protein, Cse3 family Tax=Acidiphilium RepID=A5FZH9_ACICJ
CRISPR-associated Cse3 family protein
CRISPR-associated protein, Cse3 family {ECO:0000313|EMBL:ABQ31011.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
anamox1_curated_scaffold_2349_21
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19431..20369
DNA (939bp) protein (313aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
CRISPR-associated endonuclease Cas1 1 Tax=Rhodospirillum rubrum RepID=CAS1A_RHORT
CRISPR-associated protein Cas1
anamox1_curated_scaffold_2349_22
Komagataeibacter medellinensis, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20350..20664
DNA (315bp) protein (105aa)
Putative uncharacterized protein Tax=Rhodospirillum rubrum F11 RepID=G2T672_RHORU
hypothetical protein
CRISPR-associated protein {ECO:0000313|EMBL:BAK83188.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter medellinensis (strain NBRC 3288 / BCRC 11682 / LMG; 1693 / Kondo 51) (Gluconacetobacter medellinensis).;"
anamox1_curated_scaffold_2349_23
Actinobaculum sp. oral taxon 183, Actinobaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(20738..21304)
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=Actinobaculum sp. oral taxon 183 str. F0552 RepID=U1QDN8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERH20064.1}; species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinobaculum.;" source="Actinobaculum sp. oral taxon 183 str. F0552.;"
hypothetical protein
Displaying 25 items

View Taxonomy