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anamox1_curated_scaffold_1038

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1038_1
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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64..1305
DNA (1242bp) protein (414aa)
Serine/threonine specific protein phosphatase:Exonuclease SbcD Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q820L8_NITEU
sbcD; Serine/threonine specific protein phosphatase:exonuclease SbcD
Serine/threonine specific protein phosphatase:Exonuclease SbcD {ECO:0000313|EMBL:CAD85301.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
anamox1_curated_scaffold_1038_2
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1424..1804)
DNA (381bp) protein (127aa)
Putative fluoride ion transporter CrcB Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=CRCB_METFK
camphor resistance protein CrcB
Putative fluoride ion transporter CrcB {ECO:0000255|HAMAP-Rule:MF_00454}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
anamox1_curated_scaffold_1038_3
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2035..2376
DNA (342bp) protein (114aa)
Putative calcium-binding protein Tax=Methylomicrobium album BG8 RepID=H8GIW1_METAL
Putative calcium-binding protein {ECO:0000313|EMBL:EIC30301.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
cold-shock DNA-binding protein family
anamox1_curated_scaffold_1038_4
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2521..3618)
DNA (1098bp) protein (366aa)
Radical SAM domain protein Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GFQ3_NITSI
Radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:AEJ02332.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
anamox1_curated_scaffold_1038_5
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3611..4210)
DNA (600bp) protein (200aa)
AMMECR1 domain protein Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GFQ4_NITSI
AMMECR1 domain-containing protein
AMMECR1 domain protein {ECO:0000313|EMBL:AEJ02333.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
anamox1_curated_scaffold_1038_6
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4194..5009)
DNA (816bp) protein (272aa)
MEMO1 family protein Nit79A3_2567 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GFQ5_NITSI
hypothetical protein
MEMO1 family protein Nit79A3_2567 {ECO:0000256|HAMAP-Rule:MF_00055}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
anamox1_curated_scaffold_1038_7
unknown

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comp(5261..5419)
DNA (159bp) protein (53aa)

This feature has no annotations

anamox1_curated_scaffold_1038_8
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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5646..8909
DNA (3264bp) protein (1088aa)
ATP/GTP-binding site motif A (P-loop):ABC transporter Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82UT3_NITEU
sbcC; ABC transporter ATPase
ATP/GTP-binding site motif A (P-loop):ABC transporter {ECO:0000313|EMBL:CAD85303.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
anamox1_curated_scaffold_1038_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8951..10264)
DNA (1314bp) protein (438aa)
Membrane protein involved in aromatic hydrocarbon degradation Tax=Gillisia limnaea DSM 15749 RepID=H2BTG6_9FLAO
Hydrocarbon degradation protein {ECO:0000313|EMBL:KIC90913.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
anamox1_curated_scaffold_1038_10
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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10643..10930
DNA (288bp) protein (96aa)
CheW-like domain Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82UT2_NITEU
chemotaxis protein CheW
CheW-like domain {ECO:0000313|EMBL:CAD85308.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
anamox1_curated_scaffold_1038_11
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10944..11690)
DNA (747bp) protein (249aa)
DNA polymerase-like protein (EC:2.7.7.7)
Putative DNA polymerase-related protein, bacteriophage-type {ECO:0000313|EMBL:CAD85309.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CAD85309.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
Putative DNA polymerase-related protein, bacteriophage-type Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82UT1_NITEU
anamox1_curated_scaffold_1038_12
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11748..12272)
DNA (525bp) protein (175aa)
N-acetyltransferase GCN5 (EC:2.3.1.128)
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CAD85310.1}; EC=2.3.1.128 {ECO:0000313|EMBL:CAD85310.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
GCN5-related N-acetyltransferase Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82UT0_NITEU
anamox1_curated_scaffold_1038_13
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12275..12952)
DNA (678bp) protein (226aa)
Glycoprotease, (M22) metallo-protease family Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82US9_NITEU
yeaZ; glycoprotease
Glycoprotease, (M22) metallo-protease family {ECO:0000313|EMBL:CAD85311.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
anamox1_curated_scaffold_1038_14
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12952..13497)
DNA (546bp) protein (182aa)
ligT; 2'-5' RNA ligase (EC:6.5.1.-)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
Putative 2'-5' RNA ligase Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82US8_NITEU
anamox1_curated_scaffold_1038_15
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13503..13994)
DNA (492bp) protein (164aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000255|HAMAP-Rule:MF_00107}; Short=MECDP-synthase {ECO:0000255|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000255|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000255|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000255|HAMAP-Rule:MF_00107};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=ISPF_NITEU
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
anamox1_curated_scaffold_1038_16
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14037..15605)
DNA (1569bp) protein (523aa)
4-cresol dehydrogenase (EC:1.17.99.1)
4-cresol dehydrogenase (Hydroxylating) {ECO:0000313|EMBL:ABI59898.1}; EC=1.17.99.1 {ECO:0000313|EMBL:ABI59898.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
4-cresol dehydrogenase (Hydroxylating) Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AFI4_NITEC
anamox1_curated_scaffold_1038_17
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15617..16327)
DNA (711bp) protein (237aa)
Uncharacterized protein Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AFI3_NITEC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI59899.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
anamox1_curated_scaffold_1038_18
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16338..16694)
DNA (357bp) protein (119aa)
Uncharacterized protein Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AFI2_NITEC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI59900.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
anamox1_curated_scaffold_1038_19
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16878..17225)
DNA (348bp) protein (116aa)
uroporphyrin-III C-methyltransferase (EC:2.1.1.107)
Putative uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:CAD85314.1}; EC=2.1.1.107 {ECO:0000313|EMBL:CAD85314.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
Putative uroporphyrin-III C-methyltransferase Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82US6_NITEU
anamox1_curated_scaffold_1038_20
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17280..17963
DNA (684bp) protein (228aa)
ABC transporter, ATP-binding protein Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82US5_NITEU
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CAD85315.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
anamox1_curated_scaffold_1038_21
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17960..20509
DNA (2550bp) protein (850aa)
DUF214 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82US4_NITEU
hypothetical protein
DUF214 {ECO:0000313|EMBL:CAD85316.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
anamox1_curated_scaffold_1038_22
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20509..21588
DNA (1080bp) protein (360aa)
Putative AttH Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82US3_NITEU
AttH
Putative AttH {ECO:0000313|EMBL:CAD85317.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
anamox1_curated_scaffold_1038_23
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21813..22055
DNA (243bp) protein (81aa)
Uncharacterized protein family UPF0033 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82US2_NITEU
hypothetical protein
Uncharacterized protein family UPF0033 {ECO:0000313|EMBL:CAD85318.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
anamox1_curated_scaffold_1038_24
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22208..23548)
DNA (1341bp) protein (447aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
Sensory transduction histidine kinases Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82US1_NITEU
sensory transduction histidine kinase
anamox1_curated_scaffold_1038_25
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23545..24231)
DNA (687bp) protein (229aa)
Possible phoP Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q820L7_NITEU
response regulator PhoP
Possible phoP Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain {ECO:0000313|EMBL:CAD85320.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
anamox1_curated_scaffold_1038_26
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24312..24602)
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82US0_NITEU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD85321.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
anamox1_curated_scaffold_1038_27
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24687..25028)
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AGC0_NITEC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI59612.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
anamox1_curated_scaffold_1038_28
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25558..25719
DNA (162bp) protein (54aa)
Ammonia monooxygenase 3 subunit C Tax=Nitrosomonas europaea RepID=H2VFV0_NITEU
amoC3; ammonia monooxygenase 3 subunit C
Ammonia monooxygenase 3 subunit C {ECO:0000313|EMBL:CAD85322.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
Displaying 28 items

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