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anamox1_curated_scaffold_2288

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2288_1
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(2..346)
DNA (345bp) protein (115aa)
Tetratricopeptide TPR_2 repeat protein Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R634_PIRSD
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ADB19119.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
anamox1_curated_scaffold_2288_2
Latrodectus hesperus, Latrodectus, Araneae, Arachnida, Arthropoda, Metazoa

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706..1776
DNA (1071bp) protein (357aa)
hypothetical protein Tax=Streptomyces RepID=UPI0003769DCE
Major ampullate spidroin 2 {ECO:0000313|EMBL:ABR68855.1}; species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Araneoidea; Theridiidae; Latrodectus.;" source="Latrodectus hesperus (Western black widow spider).;"
hypothetical protein
anamox1_curated_scaffold_2288_trna_1
unknown

Not on your lists

2251..2324
DNA (74bp)
transferRNA Thr
anamox1_curated_scaffold_2288_3
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2491..3825
DNA (1335bp) protein (445aa)
RNA polymerase alpha subunit domain protein Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R234_PIRSD
RNA polymerase subunit alpha
RNA polymerase alpha subunit domain protein {ECO:0000313|EMBL:ADB18645.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
anamox1_curated_scaffold_2288_4
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

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3863..4975
DNA (1113bp) protein (371aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R233_PIRSD
Tax=RBG_13_Planctomycetes_63_9_curated
anamox1_curated_scaffold_2288_5
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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5272..5907
DNA (636bp) protein (212aa)
50S ribosomal protein L25 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R6P0_PIRSD
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
Tax=RBG_16_Planctomycetes_64_12_curated
anamox1_curated_scaffold_2288_6
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6008..6571
DNA (564bp) protein (188aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R6N9_PIRSD
Tax=RBG_16_Planctomycetes_64_12_curated
anamox1_curated_scaffold_2288_7
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


6568..7044
DNA (477bp) protein (159aa)
30S ribosomal protein S6 Tax=Blastopirellula marina DSM 3645 RepID=A3ZL44_9PLAN
30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
anamox1_curated_scaffold_2288_8
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7441..7932
DNA (492bp) protein (164aa)
Single-stranded DNA-binding protein Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R6N7_PIRSD
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
anamox1_curated_scaffold_2288_9
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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8053..8598
DNA (546bp) protein (182aa)
50S ribosomal protein L9 Tax=Blastopirellula marina DSM 3645 RepID=A3ZL42_9PLAN
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
50S ribosomal protein L9
anamox1_curated_scaffold_2288_10
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8988..10397
DNA (1410bp) protein (470aa)
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase Tax=Rhodopirellula sallentina SM41 RepID=M5U7Z6_9PLAN
Replicative DNA helicase {ECO:0000313|EMBL:EMI57582.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
anamox1_curated_scaffold_2288_11
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10565..11761
DNA (1197bp) protein (399aa)
Putative regulator Tax=Planctomyces maris DSM 8797 RepID=A6C4R2_9PLAN
Putative regulator {ECO:0000313|EMBL:EDL60495.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
protein serine/threonine phosphatase
anamox1_curated_scaffold_2288_12
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12048..12887)
DNA (840bp) protein (280aa)
Uncharacterized protein Tax=uncultured bacterium A1Q1_fos_962 RepID=L7VX40_9BACT
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
anamox1_curated_scaffold_2288_13
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13690..13989
DNA (300bp) protein (100aa)
transposase Tax=Schlesneria paludicola RepID=UPI00029B490F
transposase IS204/IS1001/IS1096/IS1165 family protein
Transposase IS204/IS1001/IS1096/IS1165 family protein {ECO:0000313|EMBL:ADW11981.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
Displaying 14 items

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