ggKbase home page

anamox1_curated_scaffold_1649

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1649_1
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1..942)
DNA (942bp) protein (314aa)
NAD-dependent epimerase/dehydratase Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R8K4_PIRSD
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADB17545.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
anamox1_curated_scaffold_1649_2
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1131..2405)
DNA (1275bp) protein (425aa)
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
Glutamyl-tRNA reductase Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R2G8_PIRSD
anamox1_curated_scaffold_1649_3
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2402..3310)
DNA (909bp) protein (303aa)
Uncharacterized protein Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R2G7_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB15076.1}; Flags: Precursor;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
anamox1_curated_scaffold_1649_4
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4010..4843)
DNA (834bp) protein (278aa)
RNA polymerase sigma 28 subunit FliA/WhiG (EC:4.1.1.65)
RNA polymerase sigma factor Tax=Blastopirellula marina DSM 3645 RepID=A3ZZN5_9PLAN
Tax=RBG_16_Planctomycetes_64_10_curated
anamox1_curated_scaffold_1649_5
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(5233..6438)
DNA (1206bp) protein (402aa)
GTP-binding signal recognition particle SRP54, G-domain Tax=Planctomyces maris DSM 8797 RepID=A6C932_9PLAN
GTP-binding signal recognition particle SRP54 G-domain-containing protein
Tax=RBG_13_Planctomycetes_63_9_curated
anamox1_curated_scaffold_1649_6
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6484..8454)
DNA (1971bp) protein (657aa)
Flagellar biosynthesis protein FlhA Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QZ28_PIRSD
flagellar biosynthesis protein FlhA
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:ADB18220.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
anamox1_curated_scaffold_1649_7
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8958..10178
DNA (1221bp) protein (407aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI000376A4C7
oxidoreductase domain-containing protein
Tax=RBG_13_Planctomycetes_63_9_curated
anamox1_curated_scaffold_1649_8
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10350..11192
DNA (843bp) protein (281aa)
hypothetical protein Tax=Pedobacter arcticus RepID=UPI0002F0FB5F
Tax=RBG_13_Planctomycetes_63_9_curated
anamox1_curated_scaffold_1649_9

Not on your lists

11439..12146
DNA (708bp) protein (236aa)
Uncharacterized protein Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0CJM4_9BACL
Marine sediment metagenome DNA, contig: S01H1_S19034 {ECO:0000313|EMBL:GAG15439.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase
anamox1_curated_scaffold_1649_10

Not on your lists

12431..13036
DNA (606bp) protein (202aa)
Transposase IS4 family protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKC1_ACCPU
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48425.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase IS4 family protein
anamox1_curated_scaffold_1649_11
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13722..14000
DNA (279bp) protein (93aa)
Protein containing RNA recognition motif, RNP-1 domain protein Tax=Rhodopirellula baltica SH28 RepID=K5C9M0_RHOBT
grp; RNA-binding protein
RNA recognition motif, RNP-1 domain protein {ECO:0000313|EMBL:EMI26333.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
anamox1_curated_scaffold_1649_12
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14031..15872)
DNA (1842bp) protein (614aa)
Ferredoxin Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RB72_AMMDK
ferredoxin
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox1_curated_scaffold_1649_13
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16002..18062)
DNA (2061bp) protein (687aa)
FG-GAP repeat protein Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R964_PIRSD
FG-GAP repeat-containing protein
FG-GAP repeat protein {ECO:0000313|EMBL:ADB15891.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
Displaying 13 items

View Taxonomy