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anamox1_curated_scaffold_3441

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3441_1

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1..303
DNA (303bp) protein (101aa)
Ribosomal protein S10, bacterial Tax=mine drainage metagenome RepID=T1D7Q9_9ZZZZ
Ribosomal protein S10, bacterial {ECO:0000313|EMBL:EQD78285.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rpsJ; 30S ribosomal protein S10
anamox1_curated_scaffold_3441_2
unknown

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585..1307
DNA (723bp) protein (241aa)

This feature has no annotations

anamox1_curated_scaffold_3441_3
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1349..2281
DNA (933bp) protein (311aa)
ParB-like nuclease domain Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PKS0_CELJU
ParB-like nuclease domain
ParB-like nuclease domain {ECO:0000313|EMBL:ACE84971.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
anamox1_curated_scaffold_3441_4
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2687..3109)
DNA (423bp) protein (141aa)
Putative toxin-antitoxin system toxin component, PIN family Tax=Thioflavicoccus mobilis 8321 RepID=L0H040_9GAMM
toxin-antitoxin system toxin component, PIN family
Tax=RBG_16_Gammaproteobacteria_62_13__curated
anamox1_curated_scaffold_3441_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3093..3326)
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Thioflavicoccus mobilis 8321 RepID=L0GXD4_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
anamox1_curated_scaffold_3441_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3323..3703)
DNA (381bp) protein (127aa)
Phage regulatory protein Tax=Ralstonia solanacearum (strain Po82) RepID=F6G840_RALS8
phage regulatory protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
anamox1_curated_scaffold_3441_7
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4076..4372
DNA (297bp) protein (99aa)
Putative transposase Tax=Burkholderia xenovorans (strain LB400) RepID=Q144J0_BURXL
Transposase {ECO:0000313|EMBL:KDR24818.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
sigma-70, region 4 family protein
anamox1_curated_scaffold_3441_8
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4960..5400)
DNA (441bp) protein (147aa)
Transcriptional regulator, MarR family Tax=Thalassobacter arenae DSM 19593 RepID=S9QMS3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KEJ96332.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseudonitzschiae.;"
transcriptional regulator, MarR family protein
anamox1_curated_scaffold_3441_9
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5460..5891
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Thalassobacter arenae DSM 19593 RepID=S9QN30_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EPX81018.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Litoreibacter.;" source="Litoreibacter arenae DSM 19593.;"
hypothetical protein
anamox1_curated_scaffold_3441_10
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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6341..7048
DNA (708bp) protein (236aa)
50S ribosomal protein L3 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037F8161
50S ribosomal protein L3
Tax=RBG_16_Gammaproteobacteria_66_13_curated
anamox1_curated_scaffold_3441_11
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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7061..7675
DNA (615bp) protein (205aa)
50S ribosomal protein L4 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KDP5_9GAMM
rplD; 50S ribosomal protein L4
Tax=RBG_16_Gammaproteobacteria_66_13_curated
anamox1_curated_scaffold_3441_12

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7672..7977
DNA (306bp) protein (102aa)
50S ribosomal protein L23 Tax=mine drainage metagenome RepID=T1CCS9_9ZZZZ
50S ribosomal protein L23 {ECO:0000313|EMBL:EQD80157.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rplW; 50S ribosomal protein L23
anamox1_curated_scaffold_3441_13
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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7989..8825
DNA (837bp) protein (279aa)
50S ribosomal protein L2 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WF49_9GAMM
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax hongdengensis A-11-3.;"
anamox1_curated_scaffold_3441_14

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8840..9121
DNA (282bp) protein (94aa)
Ribosomal protein S19, bacterial-type Tax=mine drainage metagenome RepID=T1DFQ9_9ZZZZ
Ribosomal protein S19, bacterial-type {ECO:0000313|EMBL:EQD80159.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
30S ribosomal protein S19
anamox1_curated_scaffold_3441_15

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9124..9465
DNA (342bp) protein (114aa)
Ribosomal protein L22, bacterial-type Tax=mine drainage metagenome RepID=T1DDR1_9ZZZZ
Ribosomal protein L22, bacterial-type {ECO:0000313|EMBL:EQD80160.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
50S ribosomal protein L22
anamox1_curated_scaffold_3441_16

Not on your lists


9470..10192
DNA (723bp) protein (241aa)
Ribosomal protein S3, bacterial (Fragment) Tax=mine drainage metagenome RepID=T1ANK7_9ZZZZ
Ribosomal protein S3, bacterial {ECO:0000313|EMBL:EQD43640.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
30S ribosomal protein S3
anamox1_curated_scaffold_3441_17
unknown

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10330..10407
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 17 items

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