ggKbase home page

anamox1_curated_scaffold_2657

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2657_1
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

415..1113
DNA (699bp) protein (233aa)
Thioredoxin Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GUV8_THISH
thioredoxin
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
anamox1_curated_scaffold_2657_2
Pseudomonas oryzihabitans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1195..1647
DNA (453bp) protein (151aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryzihabitans.;"
3-dehydroquinate dehydratase Tax=Pseudomonas sp. 313 RepID=UPI00030BD599
aroQ; 3-dehydroquinate dehydratase
anamox1_curated_scaffold_2657_3

Not on your lists

1667..2128
DNA (462bp) protein (154aa)
Acetyl-CoA biotin carboxyl carrier {ECO:0000313|EMBL:EQD33573.1}; EC=6.4.1.2 {ECO:0000313|EMBL:EQD33573.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit (EC:6.4.1.2)
Acetyl-CoA biotin carboxyl carrier Tax=mine drainage metagenome RepID=T0YKC4_9ZZZZ
anamox1_curated_scaffold_2657_4
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2132..3475
DNA (1344bp) protein (448aa)
Acetyl-CoA carboxylase, biotin carboxylase Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1Z6_NITHN
acetyl-CoA carboxylase, biotin carboxylase
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:ADE16584.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
anamox1_curated_scaffold_2657_5
unknown

Not on your lists

comp(3770..4321)
DNA (552bp) protein (184aa)

This feature has no annotations

anamox1_curated_scaffold_2657_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4370..5458)
DNA (1089bp) protein (363aa)
Alcohol dehydrogenase, zinc-binding protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AV61_RUBXD
zinc-binding alcohol dehydrogenase
Alcohol dehydrogenase, zinc-binding protein {ECO:0000313|EMBL:ABG04717.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
anamox1_curated_scaffold_2657_7
Hyphomonas adhaerens, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5475..7922)
DNA (2448bp) protein (816aa)
TonB-dependent receptor Tax=Glaciecola mesophila KMM 241 RepID=K6YR79_9ALTE
TonB-dependent receptor {ECO:0000313|EMBL:KCZ86017.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas adhaerens MHS-3.;"
hypothetical protein
anamox1_curated_scaffold_2657_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8044..9150)
DNA (1107bp) protein (369aa)
FecR family transmembrane sensor protein Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFX0_9GAMM
FecR family transmembrane sensor protein {ECO:0000313|EMBL:EIL98361.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transmembrane sensor
anamox1_curated_scaffold_2657_9
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9154..9675)
DNA (522bp) protein (174aa)
hypothetical protein Tax=Dyella japonica RepID=UPI000302515B
RNA polymerase sigma70
RNA polymerase sigma70 {ECO:0000313|EMBL:AIF46984.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
anamox1_curated_scaffold_2657_10
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10497..11372
DNA (876bp) protein (292aa)
(50S ribosomal protein L11P)-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
Ribosomal protein L11 methyltransferase Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y816_THIV6
anamox1_curated_scaffold_2657_11
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11408..12487
DNA (1080bp) protein (360aa)
hypothetical protein Tax=Chitiniphilus shinanonensis RepID=UPI00036659DC
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_2657_12
unknown

Not on your lists

comp(12482..12589)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 12 items

View Taxonomy