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anamox1_curated_scaffold_1821

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1821_1
unknown

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comp(1..183)
DNA (183bp) protein (61aa)

This feature has no annotations

anamox1_curated_scaffold_1821_2
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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246..698
DNA (453bp) protein (151aa)
MarR family transcriptional regulator Tax=Achromobacter arsenitoxydans SY8 RepID=H0FA78_9BURK
MarR family transcriptional regulator {ECO:0000313|EMBL:EHK64885.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
MarR family transcriptional regulator
anamox1_curated_scaffold_1821_3
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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695..2098
DNA (1404bp) protein (468aa)
Putative outer membrane protein Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P3P5_AROAE
outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:CAI08069.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
anamox1_curated_scaffold_1821_4
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2095..3315
DNA (1221bp) protein (407aa)
Putative multidrug resistance protein Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P3P4_AROAE
multidrug resistance protein
Putative multidrug resistance protein {ECO:0000313|EMBL:CAI08070.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
anamox1_curated_scaffold_1821_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3325..4878
DNA (1554bp) protein (518aa)
Multidrug resistance protein B Tax=Variovorax paradoxus B4 RepID=T1XEZ5_VARPD
emrB; multidrug resistance protein B
Multidrug resistance protein B {ECO:0000313|EMBL:AGU50680.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
anamox1_curated_scaffold_1821_6
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5150..6436)
DNA (1287bp) protein (429aa)
Uncharacterized protein Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1QT45_CHRSD
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
anamox1_curated_scaffold_1821_7
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6500..7861
DNA (1362bp) protein (454aa)
Signal recognition particle protein Tax=Thiorhodococcus drewsii AZ1 RepID=G2DXG4_9GAMM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
Signal recognition particle, subunit Ffh SRP54
anamox1_curated_scaffold_1821_8
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

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7930..8184
DNA (255bp) protein (85aa)
30S ribosomal protein S16 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DEU6_9GAMM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
rpsP; 30S ribosomal protein S16
anamox1_curated_scaffold_1821_9
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8235..8690
DNA (456bp) protein (152aa)
16S rRNA processing protein RimM Tax=sediment metagenome RepID=D9PIJ0_9ZZZZ
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
16S rRNA processing protein RimM
anamox1_curated_scaffold_1821_10
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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8706..9467
DNA (762bp) protein (254aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI00037BA35C
tRNA (Guanine-N1)-methyltransferase {ECO:0000313|EMBL:AKH20263.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
trmD; tRNA (guanine-N1)-methyltransferase
anamox1_curated_scaffold_1821_11

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9442..9786
DNA (345bp) protein (115aa)
Ribosomal protein L19 Tax=mine drainage metagenome RepID=T1AK69_9ZZZZ
Ribosomal protein L19 {ECO:0000313|EMBL:EQD41129.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
50S ribosomal protein L19
anamox1_curated_scaffold_1821_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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10168..10422
DNA (255bp) protein (85aa)
Restriction enzyme C terminal Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EBE4_THECK
restriction enzyme C terminal
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
anamox1_curated_scaffold_1821_13
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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10609..11715
DNA (1107bp) protein (369aa)
Glucose/sorbosone dehydrogenase-like protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G777_GEOUR
glucose/sorbosone dehydrogenase-like protein
Glucose/sorbosone dehydrogenase-like lipoprotein {ECO:0000313|EMBL:CDI01189.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
anamox1_curated_scaffold_1821_14
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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11729..13567
DNA (1839bp) protein (613aa)
endopeptidase IV Tax=Nevskia ramosa RepID=UPI0003B39EF2
signal peptide peptidase SppA, 67K type
Tax=RBG_16_Acidobacteria_70_10_curated
anamox1_curated_scaffold_1821_15
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13556..14734)
DNA (1179bp) protein (393aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
2-amino-3-ketobutyrate coenzyme A ligase Tax=Burkholderia graminis C4D1M RepID=B1FUN3_9BURK
anamox1_curated_scaffold_1821_16
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14755..15519
DNA (765bp) protein (255aa)
Conserved hypothetical integral membrane protein Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CKH6_XANCA
hypothetical protein
Conserved hypothetical integral membrane protein {ECO:0000313|EMBL:AEL06511.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;"
anamox1_curated_scaffold_1821_17
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15567..16292
DNA (726bp) protein (242aa)
hypothetical protein Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030B33F0
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV26419.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
anamox1_curated_scaffold_1821_18
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16316..16600
DNA (285bp) protein (95aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPS7_PSEUU
delta-1-pyrroline-5-carboxylate dehydrogenase
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ADV26032.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
Displaying 18 items

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