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anamox1_curated_scaffold_1996

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1996_1

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comp(2..193)
DNA (192bp) protein (64aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
RNA polymerase, omega subunit Tax=mine drainage metagenome RepID=T1AI95_9ZZZZ
RNA polymerase, omega subunit {ECO:0000313|EMBL:EQD60221.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
anamox1_curated_scaffold_1996_2
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(247..879)
DNA (633bp) protein (211aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000255|HAMAP-Rule:MF_00328}; EC=2.7.4.8 {ECO:0000255|HAMAP-Rule:MF_00328};; GMP kinase {ECO:0000255|HAMAP-Rule:MF_00328}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
Guanylate kinase Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=KGUA_METCA
anamox1_curated_scaffold_1996_3
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1058..1477)
DNA (420bp) protein (140aa)
Heat shock protein Hsp20 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
small heat shock protein
Tax=RBG_16_Betaproteobacteria_56_24_curated
anamox1_curated_scaffold_1996_4
unknown

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comp(1781..2026)
DNA (246bp) protein (82aa)

This feature has no annotations

anamox1_curated_scaffold_1996_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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2154..2837
DNA (684bp) protein (228aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTZ3_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
anamox1_curated_scaffold_1996_6
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2834..3259
DNA (426bp) protein (142aa)
hypothetical protein Tax=Thermus scotoductus RepID=UPI00037AA4DD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
anamox1_curated_scaffold_1996_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3252..3479)
DNA (228bp) protein (76aa)
Putative transcriptional regulator Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WV08_9BURK
Putative transcriptional regulator {ECO:0000313|EMBL:EHR69785.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_1996_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3655..4644
DNA (990bp) protein (330aa)
Relaxase/mobilization nuclease domain-containing protein Tax=Variovorax paradoxus B4 RepID=T1XHG9_VARPD
Variovorax paradoxus strain MEDvA23 contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35475.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
relaxase/mobilization nuclease domain-containing protein
anamox1_curated_scaffold_1996_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4834..7695
DNA (2862bp) protein (954aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4YA83_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41804.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
anamox1_curated_scaffold_1996_10
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7692..9272
DNA (1581bp) protein (527aa)
hypothetical protein Tax=Hymenobacter aerophilus RepID=UPI00037F3C22
Protein of unknown function
Tax=BJP_IG2157_Desulfuromonadales_56_134
anamox1_curated_scaffold_1996_11
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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9282..10778
DNA (1497bp) protein (499aa)
Type I restriction enzyme M protein Tax=Burkholderia thailandensis MSMB43 RepID=I6AHI4_BURTH
N-6 DNA Methylase family protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
anamox1_curated_scaffold_1996_12
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11404..12027)
DNA (624bp) protein (208aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO33370.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
anamox1_curated_scaffold_1996_13
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12032..12640)
DNA (609bp) protein (203aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO33369.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
anamox1_curated_scaffold_1996_14
unknown

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12653..12892
DNA (240bp) protein (80aa)

This feature has no annotations

anamox1_curated_scaffold_1996_15
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13182..14447)
DNA (1266bp) protein (422aa)
Putative prophage integrase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJC4_METPP
prophage integrase
Putative prophage integrase {ECO:0000313|EMBL:ABM95663.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
anamox1_curated_scaffold_1996_16

Not on your lists

comp(14663..15529)
DNA (867bp) protein (289aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1B888_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD64668.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
anamox1_curated_scaffold_1996_17

Not on your lists

15588..15812
DNA (225bp) protein (75aa)
Protein serine/threonine phosphatase (Fragment) Tax=uncultured microorganism RepID=F8UHG9_9ZZZZ
Protein serine/threonine phosphatase {ECO:0000313|EMBL:AEI30476.1}; Flags: Fragment;; species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
serine/threonine protein phosphatase
Displaying 17 items

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